Hb_002639_060

Information

Type -
Description -
Location Contig2639: 57910-58363
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002639_060 0.0 - - -
2 Hb_007926_040 0.1982327296 - - sulfate transporter, putative [Ricinus communis]
3 Hb_032496_020 0.2177225391 - - -
4 Hb_002205_050 0.2298921187 - - hypothetical protein JCGZ_03335 [Jatropha curcas]
5 Hb_007101_200 0.2456858269 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 22 isoform X1 [Jatropha curcas]
6 Hb_009543_020 0.2462858956 - - PREDICTED: carboxymethylenebutenolidase homolog [Jatropha curcas]
7 Hb_003786_020 0.2491934586 - - PREDICTED: BTB/POZ domain-containing protein At3g50780 [Jatropha curcas]
8 Hb_002078_060 0.2541259652 - - hypothetical protein JCGZ_17943 [Jatropha curcas]
9 Hb_004048_090 0.2560584929 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Jatropha curcas]
10 Hb_002276_060 0.2584495573 - - hypothetical protein CISIN_1g002019mg [Citrus sinensis]
11 Hb_002025_200 0.2615160093 - - -
12 Hb_001157_060 0.2619014963 - - PREDICTED: putative nitric oxide synthase [Jatropha curcas]
13 Hb_150528_010 0.2628582075 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002141_040 0.2634364423 - - -
15 Hb_000932_100 0.263705535 - - -
16 Hb_003206_020 0.2642861679 - - PREDICTED: putative vacuolar protein sorting-associated protein 13A isoform X2 [Vitis vinifera]
17 Hb_003663_060 0.2651787296 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g43820 [Jatropha curcas]
18 Hb_022092_090 0.2662175126 - - PREDICTED: uncharacterized protein LOC105646975 [Jatropha curcas]
19 Hb_033594_130 0.2668503492 - - PREDICTED: 50S ribosomal protein L12, cyanelle-like [Jatropha curcas]
20 Hb_010589_140 0.2689088049 - - PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Fragaria vesca subsp. vesca]

Gene co-expression network

sample Hb_002639_060 Hb_002639_060 Hb_007926_040 Hb_007926_040 Hb_002639_060--Hb_007926_040 Hb_032496_020 Hb_032496_020 Hb_002639_060--Hb_032496_020 Hb_002205_050 Hb_002205_050 Hb_002639_060--Hb_002205_050 Hb_007101_200 Hb_007101_200 Hb_002639_060--Hb_007101_200 Hb_009543_020 Hb_009543_020 Hb_002639_060--Hb_009543_020 Hb_003786_020 Hb_003786_020 Hb_002639_060--Hb_003786_020 Hb_022288_020 Hb_022288_020 Hb_007926_040--Hb_022288_020 Hb_000016_110 Hb_000016_110 Hb_007926_040--Hb_000016_110 Hb_004048_090 Hb_004048_090 Hb_007926_040--Hb_004048_090 Hb_041091_010 Hb_041091_010 Hb_007926_040--Hb_041091_010 Hb_012395_190 Hb_012395_190 Hb_007926_040--Hb_012395_190 Hb_010436_020 Hb_010436_020 Hb_007926_040--Hb_010436_020 Hb_000414_030 Hb_000414_030 Hb_032496_020--Hb_000414_030 Hb_001105_190 Hb_001105_190 Hb_032496_020--Hb_001105_190 Hb_000062_420 Hb_000062_420 Hb_032496_020--Hb_000062_420 Hb_002067_020 Hb_002067_020 Hb_032496_020--Hb_002067_020 Hb_007426_160 Hb_007426_160 Hb_032496_020--Hb_007426_160 Hb_002849_040 Hb_002849_040 Hb_002205_050--Hb_002849_040 Hb_002205_050--Hb_009543_020 Hb_004060_030 Hb_004060_030 Hb_002205_050--Hb_004060_030 Hb_032458_010 Hb_032458_010 Hb_002205_050--Hb_032458_010 Hb_000696_350 Hb_000696_350 Hb_002205_050--Hb_000696_350 Hb_006663_070 Hb_006663_070 Hb_002205_050--Hb_006663_070 Hb_003206_020 Hb_003206_020 Hb_007101_200--Hb_003206_020 Hb_000832_130 Hb_000832_130 Hb_007101_200--Hb_000832_130 Hb_000951_110 Hb_000951_110 Hb_007101_200--Hb_000951_110 Hb_000959_090 Hb_000959_090 Hb_007101_200--Hb_000959_090 Hb_000136_040 Hb_000136_040 Hb_007101_200--Hb_000136_040 Hb_007101_200--Hb_009543_020 Hb_002903_080 Hb_002903_080 Hb_009543_020--Hb_002903_080 Hb_000170_190 Hb_000170_190 Hb_009543_020--Hb_000170_190 Hb_081879_030 Hb_081879_030 Hb_009543_020--Hb_081879_030 Hb_000523_090 Hb_000523_090 Hb_009543_020--Hb_000523_090 Hb_002601_130 Hb_002601_130 Hb_009543_020--Hb_002601_130 Hb_000342_080 Hb_000342_080 Hb_009543_020--Hb_000342_080 Hb_001258_040 Hb_001258_040 Hb_003786_020--Hb_001258_040 Hb_022693_060 Hb_022693_060 Hb_003786_020--Hb_022693_060 Hb_011242_040 Hb_011242_040 Hb_003786_020--Hb_011242_040 Hb_094947_010 Hb_094947_010 Hb_003786_020--Hb_094947_010 Hb_002025_200 Hb_002025_200 Hb_003786_020--Hb_002025_200 Hb_000538_200 Hb_000538_200 Hb_003786_020--Hb_000538_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.54652 0.621131 0.37321 0 2.66171 6.96027
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.329519 3.37074 1.51388 0.714446 3.70859

CAGE analysis