Hb_002659_050

Information

Type -
Description -
Location Contig2659: 69108-74126
Sequence    

Annotation

kegg
ID pop:POPTR_0002s00650g
description POPTRDRAFT_849353; hypothetical protein
nr
ID XP_012073573.1
description PREDICTED: AT-hook motif nuclear-localized protein 10 isoform X3 [Jatropha curcas]
swissprot
ID Q8VYJ2
description AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana GN=AHL1 PE=1 SV=1
trembl
ID A0A067KWX7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08036 PE=4 SV=1
Gene Ontology
ID GO:0007275
description dna-binding protein escarola

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002659_050 0.0 - - PREDICTED: AT-hook motif nuclear-localized protein 10 isoform X3 [Jatropha curcas]
2 Hb_000589_410 0.056943592 - - PREDICTED: thylakoid lumenal 15 kDa protein 1, chloroplastic-like isoform X1 [Populus euphratica]
3 Hb_006133_010 0.0771319678 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
4 Hb_005348_050 0.0854563376 - - beta-galactosidase, putative [Ricinus communis]
5 Hb_004459_050 0.0873691664 - - conserved hypothetical protein [Ricinus communis]
6 Hb_043935_010 0.0887486413 - - Receptor protein kinase-like protein [Medicago truncatula]
7 Hb_008948_130 0.1055105448 - - conserved hypothetical protein [Ricinus communis]
8 Hb_080791_010 0.106127882 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
9 Hb_011618_010 0.1091871431 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
10 Hb_000026_060 0.1128155625 - - beta-1,3-glucanase [Manihot esculenta]
11 Hb_012539_080 0.1140973641 - - Polyprotein, putative [Solanum demissum]
12 Hb_010381_080 0.1150055883 - - cytochrome P450, putative [Ricinus communis]
13 Hb_002870_070 0.1156632251 - - multidrug resistance pump, putative [Ricinus communis]
14 Hb_000185_010 0.1160517353 - - Alliin lyase precursor, putative [Ricinus communis]
15 Hb_000223_090 0.1176845913 - - Blue copper protein precursor, putative [Ricinus communis]
16 Hb_003171_040 0.119717682 - - multidrug resistance pump, putative [Ricinus communis]
17 Hb_000012_370 0.1209692308 - - conserved hypothetical protein [Ricinus communis]
18 Hb_015817_010 0.1210315 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
19 Hb_006147_020 0.1227202486 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003186_030 0.1258797204 transcription factor TF Family: MYB hypothetical protein POPTR_0012s05720g [Populus trichocarpa]

Gene co-expression network

sample Hb_002659_050 Hb_002659_050 Hb_000589_410 Hb_000589_410 Hb_002659_050--Hb_000589_410 Hb_006133_010 Hb_006133_010 Hb_002659_050--Hb_006133_010 Hb_005348_050 Hb_005348_050 Hb_002659_050--Hb_005348_050 Hb_004459_050 Hb_004459_050 Hb_002659_050--Hb_004459_050 Hb_043935_010 Hb_043935_010 Hb_002659_050--Hb_043935_010 Hb_008948_130 Hb_008948_130 Hb_002659_050--Hb_008948_130 Hb_000185_010 Hb_000185_010 Hb_000589_410--Hb_000185_010 Hb_011618_010 Hb_011618_010 Hb_000589_410--Hb_011618_010 Hb_006132_080 Hb_006132_080 Hb_000589_410--Hb_006132_080 Hb_003186_030 Hb_003186_030 Hb_000589_410--Hb_003186_030 Hb_000589_410--Hb_005348_050 Hb_006133_010--Hb_004459_050 Hb_004807_040 Hb_004807_040 Hb_006133_010--Hb_004807_040 Hb_101097_010 Hb_101097_010 Hb_006133_010--Hb_101097_010 Hb_001289_050 Hb_001289_050 Hb_006133_010--Hb_001289_050 Hb_000270_040 Hb_000270_040 Hb_006133_010--Hb_000270_040 Hb_000223_090 Hb_000223_090 Hb_005348_050--Hb_000223_090 Hb_001894_100 Hb_001894_100 Hb_005348_050--Hb_001894_100 Hb_005348_050--Hb_011618_010 Hb_001790_060 Hb_001790_060 Hb_005348_050--Hb_001790_060 Hb_008253_050 Hb_008253_050 Hb_005348_050--Hb_008253_050 Hb_004459_050--Hb_043935_010 Hb_015807_020 Hb_015807_020 Hb_004459_050--Hb_015807_020 Hb_010381_080 Hb_010381_080 Hb_004459_050--Hb_010381_080 Hb_080791_010 Hb_080791_010 Hb_004459_050--Hb_080791_010 Hb_015817_010 Hb_015817_010 Hb_043935_010--Hb_015817_010 Hb_004392_030 Hb_004392_030 Hb_043935_010--Hb_004392_030 Hb_006147_020 Hb_006147_020 Hb_043935_010--Hb_006147_020 Hb_012539_080 Hb_012539_080 Hb_043935_010--Hb_012539_080 Hb_043935_010--Hb_010381_080 Hb_000221_130 Hb_000221_130 Hb_008948_130--Hb_000221_130 Hb_003033_020 Hb_003033_020 Hb_008948_130--Hb_003033_020 Hb_007044_020 Hb_007044_020 Hb_008948_130--Hb_007044_020 Hb_001191_060 Hb_001191_060 Hb_008948_130--Hb_001191_060 Hb_010812_030 Hb_010812_030 Hb_008948_130--Hb_010812_030 Hb_001310_020 Hb_001310_020 Hb_008948_130--Hb_001310_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0455725 0.0263891 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00865758 0.136893

CAGE analysis