Hb_002660_060

Information

Type -
Description -
Location Contig2660: 49051-49572
Sequence    

Annotation

kegg
ID rcu:RCOM_1355930
description hypothetical protein
nr
ID XP_012082356.1
description PREDICTED: uncharacterized protein LOC105642215 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K226
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16502 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27781: 48536-49142
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002660_060 0.0 - - PREDICTED: uncharacterized protein LOC105642215 [Jatropha curcas]
2 Hb_002805_020 0.197719428 transcription factor TF Family: SRS transcription factor, putative [Ricinus communis]
3 Hb_000671_160 0.203963538 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Jatropha curcas]
4 Hb_000671_170 0.233095168 - - kinase, putative [Ricinus communis]
5 Hb_002486_010 0.2401810888 - - PREDICTED: sister chromatid cohesion 1 protein 1 [Jatropha curcas]
6 Hb_000676_270 0.2476805459 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 1 [Jatropha curcas]
7 Hb_000554_030 0.2494367062 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 isoform X1 [Jatropha curcas]
8 Hb_000672_150 0.2499234044 - - Patatin T5 precursor, putative [Ricinus communis]
9 Hb_031862_040 0.2574452257 - - purine transporter, putative [Ricinus communis]
10 Hb_001113_030 0.259775822 - - PREDICTED: transmembrane protein 45A-like [Jatropha curcas]
11 Hb_003055_170 0.2606167633 transcription factor TF Family: NAC PREDICTED: NAC transcription factor 25 isoform X1 [Jatropha curcas]
12 Hb_007157_030 0.2632152471 - - PREDICTED: protein LURP-one-related 6-like [Jatropha curcas]
13 Hb_000626_040 0.2653687907 - - PREDICTED: TATA-box-binding protein 1-like [Jatropha curcas]
14 Hb_025708_020 0.2755683826 - - receptor protein kinase, putative [Ricinus communis]
15 Hb_000649_150 0.2756008997 - - PREDICTED: uncharacterized protein LOC105634115 [Jatropha curcas]
16 Hb_008438_010 0.2776359276 - - PREDICTED: uncharacterized protein LOC104245771 [Nicotiana sylvestris]
17 Hb_000983_080 0.282579621 transcription factor TF Family: bZIP PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]
18 Hb_000011_420 0.2830685432 - - PREDICTED: GDSL esterase/lipase At1g29660-like [Citrus sinensis]
19 Hb_001619_040 0.283158803 - - PREDICTED: uncharacterized protein LOC105630601 [Jatropha curcas]
20 Hb_005433_060 0.2863429349 - - PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Jatropha curcas]

Gene co-expression network

sample Hb_002660_060 Hb_002660_060 Hb_002805_020 Hb_002805_020 Hb_002660_060--Hb_002805_020 Hb_000671_160 Hb_000671_160 Hb_002660_060--Hb_000671_160 Hb_000671_170 Hb_000671_170 Hb_002660_060--Hb_000671_170 Hb_002486_010 Hb_002486_010 Hb_002660_060--Hb_002486_010 Hb_000676_270 Hb_000676_270 Hb_002660_060--Hb_000676_270 Hb_000554_030 Hb_000554_030 Hb_002660_060--Hb_000554_030 Hb_002805_020--Hb_002486_010 Hb_002805_020--Hb_000671_160 Hb_007747_180 Hb_007747_180 Hb_002805_020--Hb_007747_180 Hb_013766_010 Hb_013766_010 Hb_002805_020--Hb_013766_010 Hb_000297_020 Hb_000297_020 Hb_002805_020--Hb_000297_020 Hb_000671_160--Hb_000671_170 Hb_000868_100 Hb_000868_100 Hb_000671_160--Hb_000868_100 Hb_002284_190 Hb_002284_190 Hb_000671_160--Hb_002284_190 Hb_000694_060 Hb_000694_060 Hb_000671_160--Hb_000694_060 Hb_000671_170--Hb_000868_100 Hb_000672_150 Hb_000672_150 Hb_000671_170--Hb_000672_150 Hb_001959_120 Hb_001959_120 Hb_000671_170--Hb_001959_120 Hb_001113_030 Hb_001113_030 Hb_000671_170--Hb_001113_030 Hb_008173_030 Hb_008173_030 Hb_000671_170--Hb_008173_030 Hb_002486_010--Hb_007747_180 Hb_082182_010 Hb_082182_010 Hb_002486_010--Hb_082182_010 Hb_002486_010--Hb_013766_010 Hb_007747_140 Hb_007747_140 Hb_002486_010--Hb_007747_140 Hb_000011_420 Hb_000011_420 Hb_002486_010--Hb_000011_420 Hb_000802_110 Hb_000802_110 Hb_000676_270--Hb_000802_110 Hb_000676_270--Hb_000672_150 Hb_168707_040 Hb_168707_040 Hb_000676_270--Hb_168707_040 Hb_000343_180 Hb_000343_180 Hb_000676_270--Hb_000343_180 Hb_005048_050 Hb_005048_050 Hb_000676_270--Hb_005048_050 Hb_005539_260 Hb_005539_260 Hb_000554_030--Hb_005539_260 Hb_000398_050 Hb_000398_050 Hb_000554_030--Hb_000398_050 Hb_007975_050 Hb_007975_050 Hb_000554_030--Hb_007975_050 Hb_000856_050 Hb_000856_050 Hb_000554_030--Hb_000856_050 Hb_002527_050 Hb_002527_050 Hb_000554_030--Hb_002527_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.312483 14.7321 0.638613 6.25798 0.100759 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.876139 6.98199 14.9536 11.9733 2.22652

CAGE analysis