Hb_002662_110

Information

Type -
Description -
Location Contig2662: 96876-108665
Sequence    

Annotation

kegg
ID rcu:RCOM_1589540
description Kinesin heavy chain, putative
nr
ID XP_002510177.1
description Kinesin heavy chain, putative [Ricinus communis]
swissprot
ID Q8GS71
description Kinesin-like protein FRA1 OS=Arabidopsis thaliana GN=FRA1 PE=1 SV=1
trembl
ID B9R784
description Kinesin-like protein OS=Ricinus communis GN=RCOM_1589540 PE=3 SV=1
Gene Ontology
ID GO:0005737
description p-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27817: 96861-108630 , PASA_asmbl_27818: 97020-108630 , PASA_asmbl_27819: 97011-108630
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002662_110 0.0 - - Kinesin heavy chain, putative [Ricinus communis]
2 Hb_004994_330 0.0864504101 - - DNA binding protein, putative [Ricinus communis]
3 Hb_005276_070 0.0900020893 - - PREDICTED: RAN GTPase-activating protein 1 [Jatropha curcas]
4 Hb_000612_090 0.0940273345 - - PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Jatropha curcas]
5 Hb_003416_020 0.0985670369 - - pentatricopeptide repeat-containing family protein [Populus trichocarpa]
6 Hb_000679_080 0.1027527663 - - PREDICTED: lactation elevated protein 1 isoform X1 [Jatropha curcas]
7 Hb_032631_030 0.1031064272 - - phosphatidic acid phosphatase, putative [Ricinus communis]
8 Hb_001180_010 0.1041143735 - - PREDICTED: glucan endo-1,3-beta-glucosidase 9 [Jatropha curcas]
9 Hb_000417_050 0.1089949791 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1 [Jatropha curcas]
10 Hb_172426_060 0.1100234761 - - PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Jatropha curcas]
11 Hb_001677_040 0.1146400727 - - PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Jatropha curcas]
12 Hb_005977_060 0.1146805687 - - conserved hypothetical protein [Ricinus communis]
13 Hb_007765_130 0.1182873885 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic [Jatropha curcas]
14 Hb_000108_150 0.1201307993 - - alpha/beta hydrolase, putative [Ricinus communis]
15 Hb_001365_030 0.1201703156 - - PREDICTED: uncharacterized protein LOC102609547 [Citrus sinensis]
16 Hb_000076_030 0.1207657738 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 isoform X1 [Jatropha curcas]
17 Hb_000441_050 0.1212306553 - - PREDICTED: 187-kDa microtubule-associated protein AIR9 [Jatropha curcas]
18 Hb_000357_070 0.1218434413 - - -
19 Hb_074197_030 0.1228028497 - - unnamed protein product [Vitis vinifera]
20 Hb_001104_150 0.1228435085 - - PREDICTED: protein ROS1 [Jatropha curcas]

Gene co-expression network

sample Hb_002662_110 Hb_002662_110 Hb_004994_330 Hb_004994_330 Hb_002662_110--Hb_004994_330 Hb_005276_070 Hb_005276_070 Hb_002662_110--Hb_005276_070 Hb_000612_090 Hb_000612_090 Hb_002662_110--Hb_000612_090 Hb_003416_020 Hb_003416_020 Hb_002662_110--Hb_003416_020 Hb_000679_080 Hb_000679_080 Hb_002662_110--Hb_000679_080 Hb_032631_030 Hb_032631_030 Hb_002662_110--Hb_032631_030 Hb_001180_010 Hb_001180_010 Hb_004994_330--Hb_001180_010 Hb_000465_410 Hb_000465_410 Hb_004994_330--Hb_000465_410 Hb_001544_050 Hb_001544_050 Hb_004994_330--Hb_001544_050 Hb_000417_050 Hb_000417_050 Hb_004994_330--Hb_000417_050 Hb_000207_350 Hb_000207_350 Hb_004994_330--Hb_000207_350 Hb_005977_060 Hb_005977_060 Hb_005276_070--Hb_005977_060 Hb_000441_050 Hb_000441_050 Hb_005276_070--Hb_000441_050 Hb_001365_020 Hb_001365_020 Hb_005276_070--Hb_001365_020 Hb_003053_070 Hb_003053_070 Hb_005276_070--Hb_003053_070 Hb_010632_020 Hb_010632_020 Hb_005276_070--Hb_010632_020 Hb_074197_030 Hb_074197_030 Hb_000612_090--Hb_074197_030 Hb_002235_110 Hb_002235_110 Hb_000612_090--Hb_002235_110 Hb_000612_090--Hb_000441_050 Hb_002817_040 Hb_002817_040 Hb_000612_090--Hb_002817_040 Hb_000612_090--Hb_005977_060 Hb_003416_020--Hb_000679_080 Hb_126933_020 Hb_126933_020 Hb_003416_020--Hb_126933_020 Hb_093077_010 Hb_093077_010 Hb_003416_020--Hb_093077_010 Hb_000283_030 Hb_000283_030 Hb_003416_020--Hb_000283_030 Hb_007765_130 Hb_007765_130 Hb_003416_020--Hb_007765_130 Hb_005181_120 Hb_005181_120 Hb_000679_080--Hb_005181_120 Hb_002811_250 Hb_002811_250 Hb_000679_080--Hb_002811_250 Hb_010098_040 Hb_010098_040 Hb_000679_080--Hb_010098_040 Hb_000516_080 Hb_000516_080 Hb_000679_080--Hb_000516_080 Hb_007982_040 Hb_007982_040 Hb_000679_080--Hb_007982_040 Hb_009692_040 Hb_009692_040 Hb_032631_030--Hb_009692_040 Hb_000108_150 Hb_000108_150 Hb_032631_030--Hb_000108_150 Hb_172426_060 Hb_172426_060 Hb_032631_030--Hb_172426_060 Hb_000061_250 Hb_000061_250 Hb_032631_030--Hb_000061_250 Hb_032631_030--Hb_000441_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.90939 7.44167 39.0541 34.3032 2.19309 2.33247
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.42544 1.55519 2.02397 9.46158 46.0586

CAGE analysis