Hb_002667_050

Information

Type -
Description -
Location Contig2667: 124925-134207
Sequence    

Annotation

kegg
ID rcu:RCOM_0852760
description mannosidase alpha class 2a, putative (EC:3.2.1.114)
nr
ID XP_012082412.1
description PREDICTED: alpha-mannosidase 2 [Jatropha curcas]
swissprot
ID Q9LFR0
description Alpha-mannosidase 2 OS=Arabidopsis thaliana GN=GMII PE=1 SV=1
trembl
ID A0A067LDV3
description Alpha-mannosidase OS=Jatropha curcas GN=JCGZ_09672 PE=3 SV=1
Gene Ontology
ID GO:0005768
description alpha-mannosidase 2x

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27824: 124979-134193
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002667_050 0.0 - - PREDICTED: alpha-mannosidase 2 [Jatropha curcas]
2 Hb_002099_080 0.0649629923 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Jatropha curcas]
3 Hb_005901_020 0.0843080891 - - PREDICTED: elongation factor Tu GTP-binding domain-containing protein 1 [Jatropha curcas]
4 Hb_003294_090 0.0872144663 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004020_020 0.0888924015 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g65820 [Jatropha curcas]
6 Hb_001449_040 0.0909112346 - - PREDICTED: SWR1 complex subunit 2 isoform X2 [Jatropha curcas]
7 Hb_000388_090 0.0920570076 - - PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Jatropha curcas]
8 Hb_000028_390 0.0921597058 - - PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Jatropha curcas]
9 Hb_002055_040 0.0935440953 - - PREDICTED: large subunit GTPase 1 homolog [Jatropha curcas]
10 Hb_009296_040 0.0944194883 - - hypothetical protein L484_007435 [Morus notabilis]
11 Hb_003253_040 0.096298269 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
12 Hb_002063_020 0.0973977606 - - PREDICTED: pentatricopeptide repeat-containing protein At2g17140 [Jatropha curcas]
13 Hb_001005_050 0.098849013 - - hypothetical protein Csa_3G599480 [Cucumis sativus]
14 Hb_004680_120 0.0989180501 - - PREDICTED: UDP-glucuronic acid decarboxylase 1 [Jatropha curcas]
15 Hb_003544_140 0.1020251143 - - PREDICTED: protein GDAP2 homolog isoform X1 [Jatropha curcas]
16 Hb_000340_230 0.1023019141 - - synapse-associated protein, putative [Ricinus communis]
17 Hb_001496_070 0.1028057154 - - PREDICTED: bromodomain-containing protein 3 [Jatropha curcas]
18 Hb_007820_010 0.1034491793 transcription factor TF Family: SWI/SNF-SWI3 PREDICTED: protein FLOWERING LOCUS D [Jatropha curcas]
19 Hb_006909_010 0.103599981 - - 5-oxoprolinase, putative [Ricinus communis]
20 Hb_000174_180 0.1050729668 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002667_050 Hb_002667_050 Hb_002099_080 Hb_002099_080 Hb_002667_050--Hb_002099_080 Hb_005901_020 Hb_005901_020 Hb_002667_050--Hb_005901_020 Hb_003294_090 Hb_003294_090 Hb_002667_050--Hb_003294_090 Hb_004020_020 Hb_004020_020 Hb_002667_050--Hb_004020_020 Hb_001449_040 Hb_001449_040 Hb_002667_050--Hb_001449_040 Hb_000388_090 Hb_000388_090 Hb_002667_050--Hb_000388_090 Hb_007820_010 Hb_007820_010 Hb_002099_080--Hb_007820_010 Hb_002055_040 Hb_002055_040 Hb_002099_080--Hb_002055_040 Hb_009296_040 Hb_009296_040 Hb_002099_080--Hb_009296_040 Hb_002063_020 Hb_002063_020 Hb_002099_080--Hb_002063_020 Hb_002099_080--Hb_000388_090 Hb_001199_100 Hb_001199_100 Hb_005901_020--Hb_001199_100 Hb_001496_070 Hb_001496_070 Hb_005901_020--Hb_001496_070 Hb_003253_040 Hb_003253_040 Hb_005901_020--Hb_003253_040 Hb_005901_020--Hb_001449_040 Hb_004032_380 Hb_004032_380 Hb_005901_020--Hb_004032_380 Hb_005901_020--Hb_003294_090 Hb_003294_090--Hb_003253_040 Hb_002740_110 Hb_002740_110 Hb_003294_090--Hb_002740_110 Hb_010174_110 Hb_010174_110 Hb_003294_090--Hb_010174_110 Hb_015175_020 Hb_015175_020 Hb_003294_090--Hb_015175_020 Hb_003294_090--Hb_002063_020 Hb_003370_050 Hb_003370_050 Hb_004020_020--Hb_003370_050 Hb_000028_390 Hb_000028_390 Hb_004020_020--Hb_000028_390 Hb_004020_020--Hb_002099_080 Hb_004020_020--Hb_003294_090 Hb_004020_020--Hb_007820_010 Hb_056691_060 Hb_056691_060 Hb_001449_040--Hb_056691_060 Hb_000008_290 Hb_000008_290 Hb_001449_040--Hb_000008_290 Hb_000613_050 Hb_000613_050 Hb_001449_040--Hb_000613_050 Hb_001449_040--Hb_001496_070 Hb_001343_040 Hb_001343_040 Hb_001449_040--Hb_001343_040 Hb_001357_020 Hb_001357_020 Hb_000388_090--Hb_001357_020 Hb_005736_020 Hb_005736_020 Hb_000388_090--Hb_005736_020 Hb_000388_090--Hb_002063_020 Hb_028912_050 Hb_028912_050 Hb_000388_090--Hb_028912_050 Hb_000388_090--Hb_000028_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.8799 13.4198 6.3947 18.174 17.1873 20.9877
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.3958 7.44162 23.7989 22.0317 29.1181

CAGE analysis