Hb_002671_090

Information

Type -
Description -
Location Contig2671: 149782-153532
Sequence    

Annotation

kegg
ID rcu:RCOM_0751830
description guanylate kinase, putative (EC:2.7.4.8)
nr
ID XP_012086121.1
description PREDICTED: guanylate kinase 2 [Jatropha curcas]
swissprot
ID Q9M682
description Guanylate kinase 2 OS=Arabidopsis thaliana GN=GK-2 PE=2 SV=1
trembl
ID A0A067K189
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21058 PE=4 SV=1
Gene Ontology
ID GO:0004385
description guanylate kinase 1 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27833: 149836-153509
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002671_090 0.0 - - PREDICTED: guanylate kinase 2 [Jatropha curcas]
2 Hb_000025_370 0.1063447529 - - PREDICTED: uncharacterized protein LOC105628992 isoform X1 [Jatropha curcas]
3 Hb_002028_090 0.1216804708 - - PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Jatropha curcas]
4 Hb_000300_700 0.1312474208 - - PREDICTED: adenylyl-sulfate kinase 3 [Jatropha curcas]
5 Hb_001959_010 0.1460834697 - - myosin XI, putative [Ricinus communis]
6 Hb_002260_010 0.1505348981 - - PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Sesamum indicum]
7 Hb_001188_030 0.1506576279 - - PREDICTED: proteasome subunit beta type-4-like [Jatropha curcas]
8 Hb_022318_020 0.1558854327 - - hypothetical protein JCGZ_00541 [Jatropha curcas]
9 Hb_002060_010 0.1571772601 - - PREDICTED: uncharacterized protein LOC105642435 isoform X1 [Jatropha curcas]
10 Hb_000424_200 0.1601111474 - - hypothetical protein JCGZ_07583 [Jatropha curcas]
11 Hb_004931_110 0.1605924185 - - inorganic phosphate transporter, putative [Ricinus communis]
12 Hb_002701_010 0.1608059717 - - PREDICTED: uncharacterized protein At1g04910 isoform X1 [Jatropha curcas]
13 Hb_001486_250 0.1608451227 - - PREDICTED: uncharacterized protein LOC105632605 [Jatropha curcas]
14 Hb_000676_390 0.1618604436 - - PREDICTED: protein FMP32, mitochondrial [Jatropha curcas]
15 Hb_003582_070 0.1638817488 - - conserved hypothetical protein [Ricinus communis]
16 Hb_005843_140 0.1657958523 - - Red chlorophyll catabolite reductase, chloroplast precursor, putative [Ricinus communis]
17 Hb_006355_040 0.1660802097 - - PREDICTED: chaperonin CPN60-2, mitochondrial-like [Jatropha curcas]
18 Hb_002333_070 0.1684838671 - - PREDICTED: ACT domain-containing protein ACR4-like [Jatropha curcas]
19 Hb_024074_010 0.1692537336 - - PREDICTED: cytochrome c [Jatropha curcas]
20 Hb_001252_220 0.1694200781 - - PREDICTED: uncharacterized protein LOC105640647 [Jatropha curcas]

Gene co-expression network

sample Hb_002671_090 Hb_002671_090 Hb_000025_370 Hb_000025_370 Hb_002671_090--Hb_000025_370 Hb_002028_090 Hb_002028_090 Hb_002671_090--Hb_002028_090 Hb_000300_700 Hb_000300_700 Hb_002671_090--Hb_000300_700 Hb_001959_010 Hb_001959_010 Hb_002671_090--Hb_001959_010 Hb_002260_010 Hb_002260_010 Hb_002671_090--Hb_002260_010 Hb_001188_030 Hb_001188_030 Hb_002671_090--Hb_001188_030 Hb_000025_370--Hb_002028_090 Hb_118282_010 Hb_118282_010 Hb_000025_370--Hb_118282_010 Hb_011053_010 Hb_011053_010 Hb_000025_370--Hb_011053_010 Hb_005181_160 Hb_005181_160 Hb_000025_370--Hb_005181_160 Hb_004984_030 Hb_004984_030 Hb_000025_370--Hb_004984_030 Hb_002028_090--Hb_004984_030 Hb_040819_010 Hb_040819_010 Hb_002028_090--Hb_040819_010 Hb_002028_090--Hb_001188_030 Hb_044653_040 Hb_044653_040 Hb_002028_090--Hb_044653_040 Hb_000926_200 Hb_000926_200 Hb_002028_090--Hb_000926_200 Hb_002968_040 Hb_002968_040 Hb_002028_090--Hb_002968_040 Hb_009111_020 Hb_009111_020 Hb_000300_700--Hb_009111_020 Hb_000008_400 Hb_000008_400 Hb_000300_700--Hb_000008_400 Hb_004931_110 Hb_004931_110 Hb_000300_700--Hb_004931_110 Hb_065525_120 Hb_065525_120 Hb_000300_700--Hb_065525_120 Hb_004965_110 Hb_004965_110 Hb_000300_700--Hb_004965_110 Hb_001114_080 Hb_001114_080 Hb_001959_010--Hb_001114_080 Hb_001959_010--Hb_000025_370 Hb_000394_110 Hb_000394_110 Hb_001959_010--Hb_000394_110 Hb_001959_010--Hb_009111_020 Hb_001959_010--Hb_000300_700 Hb_024074_010 Hb_024074_010 Hb_002260_010--Hb_024074_010 Hb_006256_030 Hb_006256_030 Hb_002260_010--Hb_006256_030 Hb_001252_220 Hb_001252_220 Hb_002260_010--Hb_001252_220 Hb_003020_150 Hb_003020_150 Hb_002260_010--Hb_003020_150 Hb_000731_190 Hb_000731_190 Hb_002260_010--Hb_000731_190 Hb_001493_050 Hb_001493_050 Hb_002260_010--Hb_001493_050 Hb_001718_030 Hb_001718_030 Hb_001188_030--Hb_001718_030 Hb_000676_390 Hb_000676_390 Hb_001188_030--Hb_000676_390 Hb_001431_080 Hb_001431_080 Hb_001188_030--Hb_001431_080 Hb_006355_040 Hb_006355_040 Hb_001188_030--Hb_006355_040 Hb_015299_030 Hb_015299_030 Hb_001188_030--Hb_015299_030 Hb_001931_010 Hb_001931_010 Hb_001188_030--Hb_001931_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.5591 23.6256 52.7885 23.3016 5.10737 5.11057
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.4872 59.7897 41.1641 10.5376 19.8515

CAGE analysis