Hb_002673_050

Information

Type -
Description -
Location Contig2673: 84636-92607
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002673_050 0.0 - - -
2 Hb_091369_010 0.0020307486 - - -
3 Hb_008473_010 0.003013981 - - PREDICTED: laccase-14-like [Jatropha curcas]
4 Hb_000944_010 0.0136929531 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
5 Hb_003400_030 0.0137912312 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
6 Hb_002400_450 0.0185179392 - - PREDICTED: protein MEMO1 isoform X2 [Sesamum indicum]
7 Hb_000260_190 0.0209600673 - - -
8 Hb_034667_010 0.0251190312 - - -
9 Hb_008151_030 0.0316195938 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_010399_020 0.0355225022 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
11 Hb_108404_010 0.0484691051 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
12 Hb_128287_010 0.0672083592 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
13 Hb_013205_010 0.0678858464 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
14 Hb_000204_180 0.1084472961 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
15 Hb_000227_110 0.1361045566 - - hypothetical protein CICLE_v10010500mg, partial [Citrus clementina]
16 Hb_027394_010 0.1447358502 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
17 Hb_068347_020 0.1447569931 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
18 Hb_002141_010 0.1477449137 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
19 Hb_009066_010 0.1498149964 - - -
20 Hb_021068_020 0.1704804753 - - -

Gene co-expression network

sample Hb_002673_050 Hb_002673_050 Hb_091369_010 Hb_091369_010 Hb_002673_050--Hb_091369_010 Hb_008473_010 Hb_008473_010 Hb_002673_050--Hb_008473_010 Hb_000944_010 Hb_000944_010 Hb_002673_050--Hb_000944_010 Hb_003400_030 Hb_003400_030 Hb_002673_050--Hb_003400_030 Hb_002400_450 Hb_002400_450 Hb_002673_050--Hb_002400_450 Hb_000260_190 Hb_000260_190 Hb_002673_050--Hb_000260_190 Hb_091369_010--Hb_008473_010 Hb_091369_010--Hb_000944_010 Hb_091369_010--Hb_003400_030 Hb_091369_010--Hb_002400_450 Hb_091369_010--Hb_000260_190 Hb_008473_010--Hb_000944_010 Hb_008473_010--Hb_003400_030 Hb_008473_010--Hb_002400_450 Hb_008473_010--Hb_000260_190 Hb_000944_010--Hb_003400_030 Hb_000944_010--Hb_002400_450 Hb_000944_010--Hb_000260_190 Hb_034667_010 Hb_034667_010 Hb_000944_010--Hb_034667_010 Hb_003400_030--Hb_002400_450 Hb_003400_030--Hb_000260_190 Hb_003400_030--Hb_034667_010 Hb_002400_450--Hb_000260_190 Hb_002400_450--Hb_034667_010 Hb_008151_030 Hb_008151_030 Hb_002400_450--Hb_008151_030 Hb_000260_190--Hb_034667_010 Hb_000260_190--Hb_008151_030 Hb_010399_020 Hb_010399_020 Hb_000260_190--Hb_010399_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.024557 0.0215821
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis