Hb_002675_080

Information

Type -
Description -
Location Contig2675: 70326-76156
Sequence    

Annotation

kegg
ID rcu:RCOM_0979850
description glycosyltransferase, putative
nr
ID XP_012073305.1
description PREDICTED: uncharacterized protein LOC105634950 [Jatropha curcas]
swissprot
ID Q81ST7
description N-acetyl-alpha-D-glucosaminyl L-malate synthase OS=Bacillus anthracis GN=bshA PE=1 SV=1
trembl
ID A0A067KM44
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06243 PE=4 SV=1
Gene Ontology
ID GO:0009058
description glycosyl transferase family 1 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27853: 70381-76143
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002675_080 0.0 - - PREDICTED: uncharacterized protein LOC105634950 [Jatropha curcas]
2 Hb_000042_050 0.0578831515 - - PREDICTED: uncharacterized protein LOC105632791 isoform X1 [Jatropha curcas]
3 Hb_000099_170 0.0951046632 - - PREDICTED: uncharacterized protein LOC105645733 [Jatropha curcas]
4 Hb_003849_160 0.0975666166 - - PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Jatropha curcas]
5 Hb_003582_090 0.1009036172 - - PREDICTED: 65-kDa microtubule-associated protein 6-like [Jatropha curcas]
6 Hb_003175_070 0.1037877857 - - pyrophosphate-dependent phosphofructokinase, partial [Hevea brasiliensis]
7 Hb_002026_030 0.1047945039 desease resistance Gene Name: NB-ARC PREDICTED: mitogen-activated protein kinase kinase kinase YODA [Jatropha curcas]
8 Hb_000357_070 0.1071650225 - - -
9 Hb_001053_020 0.1082154424 - - carotenoid cleavage dioxygenase 1 [Manihot esculenta]
10 Hb_017098_040 0.1091841724 - - Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
11 Hb_000414_080 0.1124400188 - - PREDICTED: triosephosphate isomerase, chloroplastic [Jatropha curcas]
12 Hb_003847_040 0.1143127254 - - adenosine diphosphatase, putative [Ricinus communis]
13 Hb_007765_130 0.1148650011 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic [Jatropha curcas]
14 Hb_000445_370 0.1161842951 - - PREDICTED: probable methyltransferase PMT24 [Jatropha curcas]
15 Hb_001021_210 0.1171342821 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
16 Hb_006916_030 0.1175691702 - - PREDICTED: uncharacterized protein LOC105646760 [Jatropha curcas]
17 Hb_001677_040 0.1183114318 - - PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Jatropha curcas]
18 Hb_001195_660 0.1196191172 - - metalloendopeptidase, putative [Ricinus communis]
19 Hb_002374_450 0.1203126334 - - PREDICTED: chlorophyllide a oxygenase, chloroplastic [Jatropha curcas]
20 Hb_004678_010 0.1223154944 transcription factor TF Family: Orphans Salt-tolerance protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002675_080 Hb_002675_080 Hb_000042_050 Hb_000042_050 Hb_002675_080--Hb_000042_050 Hb_000099_170 Hb_000099_170 Hb_002675_080--Hb_000099_170 Hb_003849_160 Hb_003849_160 Hb_002675_080--Hb_003849_160 Hb_003582_090 Hb_003582_090 Hb_002675_080--Hb_003582_090 Hb_003175_070 Hb_003175_070 Hb_002675_080--Hb_003175_070 Hb_002026_030 Hb_002026_030 Hb_002675_080--Hb_002026_030 Hb_001053_020 Hb_001053_020 Hb_000042_050--Hb_001053_020 Hb_007765_130 Hb_007765_130 Hb_000042_050--Hb_007765_130 Hb_000042_050--Hb_000099_170 Hb_000042_050--Hb_003175_070 Hb_000042_050--Hb_003849_160 Hb_071079_020 Hb_071079_020 Hb_000099_170--Hb_071079_020 Hb_000108_150 Hb_000108_150 Hb_000099_170--Hb_000108_150 Hb_000322_030 Hb_000322_030 Hb_000099_170--Hb_000322_030 Hb_005181_120 Hb_005181_120 Hb_000099_170--Hb_005181_120 Hb_000061_250 Hb_000061_250 Hb_000099_170--Hb_000061_250 Hb_029552_020 Hb_029552_020 Hb_003849_160--Hb_029552_020 Hb_000529_130 Hb_000529_130 Hb_003849_160--Hb_000529_130 Hb_001999_320 Hb_001999_320 Hb_003849_160--Hb_001999_320 Hb_009078_020 Hb_009078_020 Hb_003849_160--Hb_009078_020 Hb_000968_060 Hb_000968_060 Hb_003849_160--Hb_000968_060 Hb_000445_370 Hb_000445_370 Hb_003582_090--Hb_000445_370 Hb_001195_660 Hb_001195_660 Hb_003582_090--Hb_001195_660 Hb_003582_090--Hb_000042_050 Hb_003582_090--Hb_001053_020 Hb_003847_040 Hb_003847_040 Hb_003582_090--Hb_003847_040 Hb_000414_080 Hb_000414_080 Hb_003175_070--Hb_000414_080 Hb_000594_060 Hb_000594_060 Hb_003175_070--Hb_000594_060 Hb_003175_070--Hb_003847_040 Hb_007594_080 Hb_007594_080 Hb_003175_070--Hb_007594_080 Hb_004545_080 Hb_004545_080 Hb_003175_070--Hb_004545_080 Hb_000665_200 Hb_000665_200 Hb_002026_030--Hb_000665_200 Hb_001969_130 Hb_001969_130 Hb_002026_030--Hb_001969_130 Hb_001124_140 Hb_001124_140 Hb_002026_030--Hb_001124_140 Hb_004052_110 Hb_004052_110 Hb_002026_030--Hb_004052_110 Hb_004678_010 Hb_004678_010 Hb_002026_030--Hb_004678_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.88718 11.0784 22.1206 21.3762 3.94743 4.52665
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.7519 1.50862 2.23414 4.78023 27.5434

CAGE analysis