Hb_002685_150

Information

Type -
Description -
Location Contig2685: 142525-147012
Sequence    

Annotation

kegg
ID rcu:RCOM_1321730
description hypothetical protein
nr
ID XP_012070402.1
description PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
swissprot
ID Q9LXG9
description Plant cysteine oxidase 1 OS=Arabidopsis thaliana GN=PCO1 PE=1 SV=1
trembl
ID A0A067KTW4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02681 PE=4 SV=1
Gene Ontology
ID GO:0047800
description 2-aminoethanethiol dioxygenase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27961: 142711-146800
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002685_150 0.0 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
2 Hb_000317_160 0.1613793875 - - 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Theobroma cacao]
3 Hb_003464_070 0.1687643177 transcription factor TF Family: Trihelix PREDICTED: stress response protein NST1 [Jatropha curcas]
4 Hb_005725_230 0.1820281483 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor ANT [Jatropha curcas]
5 Hb_009615_020 0.1854396095 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 7-like [Jatropha curcas]
6 Hb_027746_020 0.1894883139 - - PREDICTED: replication protein A 70 kDa DNA-binding subunit B [Jatropha curcas]
7 Hb_000023_160 0.2046980327 - - PREDICTED: uncharacterized protein LOC105636423 isoform X1 [Jatropha curcas]
8 Hb_001584_260 0.2083097537 - - zinc finger protein, putative [Ricinus communis]
9 Hb_000916_070 0.2104109274 - - PREDICTED: sister chromatid cohesion protein DCC1-like [Jatropha curcas]
10 Hb_007545_120 0.2125642631 - - NADH:cytochrome b5 reductase [Vernicia fordii]
11 Hb_051997_020 0.2167068004 - - PREDICTED: uncharacterized protein LOC100266863 [Vitis vinifera]
12 Hb_067130_010 0.2168655195 - - protein binding protein, putative [Ricinus communis]
13 Hb_000622_200 0.2173269623 - - aldose 1-epimerase, putative [Ricinus communis]
14 Hb_002676_120 0.2193107759 - - hypothetical protein POPTR_0002s23750g [Populus trichocarpa]
15 Hb_005181_160 0.2196658681 - - PREDICTED: uncharacterized protein LOC105643546 [Jatropha curcas]
16 Hb_000318_210 0.22014511 - - PREDICTED: 40S ribosomal protein S12-like isoform X1 [Jatropha curcas]
17 Hb_003001_090 0.2207558479 - - PREDICTED: uncharacterized protein LOC105644365 [Jatropha curcas]
18 Hb_000580_100 0.2209506583 - - PREDICTED: uncharacterized protein LOC105643133 isoform X1 [Jatropha curcas]
19 Hb_002217_350 0.221073035 - - PREDICTED: importin subunit alpha-4-like [Jatropha curcas]
20 Hb_003050_260 0.2212193206 - - DNA replication licensing factor MCM3, putative [Ricinus communis]

Gene co-expression network

sample Hb_002685_150 Hb_002685_150 Hb_000317_160 Hb_000317_160 Hb_002685_150--Hb_000317_160 Hb_003464_070 Hb_003464_070 Hb_002685_150--Hb_003464_070 Hb_005725_230 Hb_005725_230 Hb_002685_150--Hb_005725_230 Hb_009615_020 Hb_009615_020 Hb_002685_150--Hb_009615_020 Hb_027746_020 Hb_027746_020 Hb_002685_150--Hb_027746_020 Hb_000023_160 Hb_000023_160 Hb_002685_150--Hb_000023_160 Hb_000317_160--Hb_005725_230 Hb_000317_160--Hb_000023_160 Hb_002217_470 Hb_002217_470 Hb_000317_160--Hb_002217_470 Hb_004137_100 Hb_004137_100 Hb_000317_160--Hb_004137_100 Hb_000317_160--Hb_027746_020 Hb_000038_120 Hb_000038_120 Hb_003464_070--Hb_000038_120 Hb_001767_130 Hb_001767_130 Hb_003464_070--Hb_001767_130 Hb_001584_260 Hb_001584_260 Hb_003464_070--Hb_001584_260 Hb_011930_150 Hb_011930_150 Hb_003464_070--Hb_011930_150 Hb_002998_070 Hb_002998_070 Hb_003464_070--Hb_002998_070 Hb_000098_030 Hb_000098_030 Hb_005725_230--Hb_000098_030 Hb_000296_010 Hb_000296_010 Hb_005725_230--Hb_000296_010 Hb_005725_230--Hb_027746_020 Hb_005725_230--Hb_004137_100 Hb_001140_070 Hb_001140_070 Hb_009615_020--Hb_001140_070 Hb_006816_260 Hb_006816_260 Hb_009615_020--Hb_006816_260 Hb_000562_030 Hb_000562_030 Hb_009615_020--Hb_000562_030 Hb_009615_020--Hb_000023_160 Hb_000329_270 Hb_000329_270 Hb_009615_020--Hb_000329_270 Hb_000916_070 Hb_000916_070 Hb_009615_020--Hb_000916_070 Hb_009193_090 Hb_009193_090 Hb_027746_020--Hb_009193_090 Hb_133004_010 Hb_133004_010 Hb_027746_020--Hb_133004_010 Hb_002676_120 Hb_002676_120 Hb_027746_020--Hb_002676_120 Hb_007545_120 Hb_007545_120 Hb_027746_020--Hb_007545_120 Hb_003050_260 Hb_003050_260 Hb_027746_020--Hb_003050_260 Hb_027746_020--Hb_004137_100 Hb_000023_160--Hb_002217_470 Hb_000654_030 Hb_000654_030 Hb_000023_160--Hb_000654_030 Hb_000023_160--Hb_001140_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.68865 2.463 18.2353 14.1056 2.2982 5.60479
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.69712 10.6098 6.25284 13.3581 0.193441

CAGE analysis