Hb_002686_020

Information

Type -
Description -
Location Contig2686: 11791-15065
Sequence    

Annotation

kegg
ID rcu:RCOM_1121710
description galactose-1-phosphate uridylyltransferase, putative (EC:2.7.7.12)
nr
ID XP_002525433.1
description galactose-1-phosphate uridylyltransferase, putative [Ricinus communis]
swissprot
ID Q9FK51
description ADP-glucose phosphorylase OS=Arabidopsis thaliana GN=At5g18200 PE=1 SV=1
trembl
ID B9SHG4
description Galactose-1-phosphate uridylyltransferase, putative OS=Ricinus communis GN=RCOM_1121710 PE=4 SV=1
Gene Ontology
ID GO:0016779
description probable galactose-1-phosphate uridyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002686_020 0.0 - - galactose-1-phosphate uridylyltransferase, putative [Ricinus communis]
2 Hb_003050_080 0.0523411966 - - 40S ribosomal protein S14, putative [Ricinus communis]
3 Hb_008878_030 0.0611990105 - - PREDICTED: uncharacterized protein At1g10890-like [Musa acuminata subsp. malaccensis]
4 Hb_001540_010 0.0617098567 - - PREDICTED: uncharacterized protein LOC105639920 [Jatropha curcas]
5 Hb_000331_080 0.062521515 - - PREDICTED: UPF0235 protein At5g63440 isoform X1 [Gossypium raimondii]
6 Hb_001821_010 0.0645061347 - - PREDICTED: uncharacterized protein C9orf78 [Jatropha curcas]
7 Hb_007416_030 0.0646701239 - - PREDICTED: transcription initiation factor TFIID subunit 10 [Jatropha curcas]
8 Hb_012725_050 0.0674419906 transcription factor TF Family: SET set domain protein, putative [Ricinus communis]
9 Hb_000479_090 0.0679529691 - - PREDICTED: zinc finger RNA-binding protein [Jatropha curcas]
10 Hb_000059_370 0.0684391323 - - PREDICTED: U6 snRNA phosphodiesterase [Jatropha curcas]
11 Hb_001105_030 0.0693040937 - - PREDICTED: probable caffeoyl-CoA O-methyltransferase At4g26220 [Jatropha curcas]
12 Hb_010921_010 0.0712488287 - - Small nuclear ribonucleoprotein family protein [Theobroma cacao]
13 Hb_001489_060 0.0730099612 - - PREDICTED: uncharacterized protein LOC105649778 isoform X2 [Jatropha curcas]
14 Hb_004931_090 0.0731818195 - - PREDICTED: chromatin modification-related protein MEAF6-like isoform X2 [Jatropha curcas]
15 Hb_002226_070 0.0732930295 - - PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Jatropha curcas]
16 Hb_002214_040 0.0745368431 - - PREDICTED: tryptophan--tRNA ligase, cytoplasmic [Jatropha curcas]
17 Hb_000127_180 0.0759404209 - - 40S ribosomal protein S18, putative [Ricinus communis]
18 Hb_006031_020 0.0760340343 - - PREDICTED: protein FLX-like 1 isoform X1 [Jatropha curcas]
19 Hb_004116_190 0.0760584491 transcription factor TF Family: Alfin-like PREDICTED: PHD finger protein ALFIN-LIKE 2 [Jatropha curcas]
20 Hb_002477_070 0.0764111887 - - Charged multivesicular body protein 2a, putative [Ricinus communis]

Gene co-expression network

sample Hb_002686_020 Hb_002686_020 Hb_003050_080 Hb_003050_080 Hb_002686_020--Hb_003050_080 Hb_008878_030 Hb_008878_030 Hb_002686_020--Hb_008878_030 Hb_001540_010 Hb_001540_010 Hb_002686_020--Hb_001540_010 Hb_000331_080 Hb_000331_080 Hb_002686_020--Hb_000331_080 Hb_001821_010 Hb_001821_010 Hb_002686_020--Hb_001821_010 Hb_007416_030 Hb_007416_030 Hb_002686_020--Hb_007416_030 Hb_063716_050 Hb_063716_050 Hb_003050_080--Hb_063716_050 Hb_000832_140 Hb_000832_140 Hb_003050_080--Hb_000832_140 Hb_001489_060 Hb_001489_060 Hb_003050_080--Hb_001489_060 Hb_003050_080--Hb_001540_010 Hb_000056_200 Hb_000056_200 Hb_003050_080--Hb_000056_200 Hb_008878_030--Hb_000331_080 Hb_008878_030--Hb_003050_080 Hb_008878_030--Hb_000832_140 Hb_004048_110 Hb_004048_110 Hb_008878_030--Hb_004048_110 Hb_004837_140 Hb_004837_140 Hb_008878_030--Hb_004837_140 Hb_001540_010--Hb_008878_030 Hb_004931_090 Hb_004931_090 Hb_001540_010--Hb_004931_090 Hb_005993_040 Hb_005993_040 Hb_001540_010--Hb_005993_040 Hb_000970_010 Hb_000970_010 Hb_001540_010--Hb_000970_010 Hb_153112_020 Hb_153112_020 Hb_000331_080--Hb_153112_020 Hb_004994_100 Hb_004994_100 Hb_000331_080--Hb_004994_100 Hb_000840_030 Hb_000840_030 Hb_000331_080--Hb_000840_030 Hb_012725_050 Hb_012725_050 Hb_000331_080--Hb_012725_050 Hb_000815_320 Hb_000815_320 Hb_001821_010--Hb_000815_320 Hb_001105_030 Hb_001105_030 Hb_001821_010--Hb_001105_030 Hb_001821_010--Hb_000056_200 Hb_001821_010--Hb_012725_050 Hb_002609_020 Hb_002609_020 Hb_001821_010--Hb_002609_020 Hb_004735_040 Hb_004735_040 Hb_001821_010--Hb_004735_040 Hb_000608_370 Hb_000608_370 Hb_007416_030--Hb_000608_370 Hb_000788_090 Hb_000788_090 Hb_007416_030--Hb_000788_090 Hb_002864_050 Hb_002864_050 Hb_007416_030--Hb_002864_050 Hb_001047_230 Hb_001047_230 Hb_007416_030--Hb_001047_230 Hb_003683_110 Hb_003683_110 Hb_007416_030--Hb_003683_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.87427 0.693554 0.964857 0.874893 1.74065 1.56415
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.30113 3.57151 1.73513 1.01883 0.963364

CAGE analysis