Hb_002687_190

Information

Type -
Description -
Location Contig2687: 196991-212865
Sequence    

Annotation

kegg
ID rcu:RCOM_1454200
description oligopeptidase B, putative (EC:3.4.21.83)
nr
ID AIA26579.1
description prolyl oligopeptidase [Cicer arietinum]
swissprot
ID P24555
description Protease 2 OS=Escherichia coli (strain K12) GN=ptrB PE=1 SV=2
trembl
ID A0A059XQ66
description Prolyl oligopeptidase OS=Cicer arietinum PE=4 SV=1
Gene Ontology
ID GO:0005829
description prolyl endopeptidase-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28085: 197899-212819 , PASA_asmbl_28087: 206456-211955 , PASA_asmbl_28088: 198549-198648
cDNA
(Sanger)
(ID:Location)		 006_N13.ab1: 197899-199911

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002687_190 0.0 - - prolyl oligopeptidase [Cicer arietinum]
2 Hb_006114_020 0.1002663 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000329_490 0.1009868386 - - hypothetical protein JCGZ_14582 [Jatropha curcas]
4 Hb_007668_020 0.1108774013 - - PREDICTED: uncharacterized protein LOC105631102 [Jatropha curcas]
5 Hb_005228_080 0.1131296237 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 3-I [Jatropha curcas]
6 Hb_002307_350 0.1136612287 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
7 Hb_006882_010 0.1172679094 - - PREDICTED: dnaJ homolog subfamily B member 1 [Cucumis sativus]
8 Hb_001278_060 0.1178201629 - - nucleotide binding protein, putative [Ricinus communis]
9 Hb_005462_020 0.1206488789 - - PREDICTED: UBP1-associated protein 2A-like [Jatropha curcas]
10 Hb_000108_080 0.1244230699 - - PREDICTED: importin-5 [Jatropha curcas]
11 Hb_002048_090 0.1245521835 - - PREDICTED: uncharacterized protein LOC105644513 [Jatropha curcas]
12 Hb_008725_130 0.1251802408 - - PREDICTED: importin subunit alpha-like [Jatropha curcas]
13 Hb_000213_070 0.1254994299 transcription factor TF Family: ERF PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 isoform X2 [Jatropha curcas]
14 Hb_078477_040 0.126210438 - - nuclear movement protein nudc, putative [Ricinus communis]
15 Hb_002903_080 0.1262788352 - - PREDICTED: splicing factor 3B subunit 2 [Jatropha curcas]
16 Hb_005214_060 0.1270316001 - - catalytic, putative [Ricinus communis]
17 Hb_022250_110 0.1272195201 - - PREDICTED: staphylococcal nuclease domain-containing protein 1 [Jatropha curcas]
18 Hb_004037_030 0.1276449237 - - PREDICTED: DNA repair endonuclease UVH1 isoform X2 [Jatropha curcas]
19 Hb_000487_220 0.1281765341 - - eukaryotic translation elongation factor, putative [Ricinus communis]
20 Hb_002883_010 0.1294049383 - - PREDICTED: putative methyltransferase NSUN6 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002687_190 Hb_002687_190 Hb_006114_020 Hb_006114_020 Hb_002687_190--Hb_006114_020 Hb_000329_490 Hb_000329_490 Hb_002687_190--Hb_000329_490 Hb_007668_020 Hb_007668_020 Hb_002687_190--Hb_007668_020 Hb_005228_080 Hb_005228_080 Hb_002687_190--Hb_005228_080 Hb_002307_350 Hb_002307_350 Hb_002687_190--Hb_002307_350 Hb_006882_010 Hb_006882_010 Hb_002687_190--Hb_006882_010 Hb_006114_020--Hb_000329_490 Hb_021409_170 Hb_021409_170 Hb_006114_020--Hb_021409_170 Hb_015763_030 Hb_015763_030 Hb_006114_020--Hb_015763_030 Hb_004881_050 Hb_004881_050 Hb_006114_020--Hb_004881_050 Hb_010180_040 Hb_010180_040 Hb_006114_020--Hb_010180_040 Hb_000335_010 Hb_000335_010 Hb_006114_020--Hb_000335_010 Hb_022250_110 Hb_022250_110 Hb_000329_490--Hb_022250_110 Hb_000029_320 Hb_000029_320 Hb_000329_490--Hb_000029_320 Hb_000329_490--Hb_006882_010 Hb_000300_580 Hb_000300_580 Hb_000329_490--Hb_000300_580 Hb_002070_070 Hb_002070_070 Hb_000329_490--Hb_002070_070 Hb_001278_060 Hb_001278_060 Hb_007668_020--Hb_001278_060 Hb_005129_050 Hb_005129_050 Hb_007668_020--Hb_005129_050 Hb_000213_070 Hb_000213_070 Hb_007668_020--Hb_000213_070 Hb_003581_020 Hb_003581_020 Hb_007668_020--Hb_003581_020 Hb_003716_020 Hb_003716_020 Hb_007668_020--Hb_003716_020 Hb_000199_080 Hb_000199_080 Hb_007668_020--Hb_000199_080 Hb_188964_010 Hb_188964_010 Hb_005228_080--Hb_188964_010 Hb_004567_100 Hb_004567_100 Hb_005228_080--Hb_004567_100 Hb_002235_320 Hb_002235_320 Hb_005228_080--Hb_002235_320 Hb_000003_790 Hb_000003_790 Hb_005228_080--Hb_000003_790 Hb_005228_080--Hb_003581_020 Hb_005408_020 Hb_005408_020 Hb_002307_350--Hb_005408_020 Hb_002249_120 Hb_002249_120 Hb_002307_350--Hb_002249_120 Hb_008725_130 Hb_008725_130 Hb_002307_350--Hb_008725_130 Hb_017895_020 Hb_017895_020 Hb_002307_350--Hb_017895_020 Hb_000914_080 Hb_000914_080 Hb_002307_350--Hb_000914_080 Hb_000021_020 Hb_000021_020 Hb_002307_350--Hb_000021_020 Hb_078477_040 Hb_078477_040 Hb_006882_010--Hb_078477_040 Hb_006882_010--Hb_022250_110 Hb_001901_080 Hb_001901_080 Hb_006882_010--Hb_001901_080 Hb_006002_030 Hb_006002_030 Hb_006882_010--Hb_006002_030 Hb_001196_060 Hb_001196_060 Hb_006882_010--Hb_001196_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.4029 10.359 11.4676 5.94872 33.4772 42.1976
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.4011 2.99346 3.91218 12.2879 8.91028

CAGE analysis