Hb_002708_010

Information

Type -
Description -
Location Contig2708: 30611-31248
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002708_010 0.0 - - -
2 Hb_185830_100 0.0016711548 - - -
3 Hb_001863_210 0.0031790453 - - -
4 Hb_006387_010 0.0117102127 - - PREDICTED: uncharacterized protein LOC105649124 [Jatropha curcas]
5 Hb_049827_010 0.0153149628 - - PREDICTED: uncharacterized protein LOC105762110 [Gossypium raimondii]
6 Hb_003392_010 0.0183838243 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
7 Hb_102355_010 0.0209063693 - - PREDICTED: uncharacterized protein LOC104094591, partial [Nicotiana tomentosiformis]
8 Hb_086484_010 0.0250840858 - - PREDICTED: uncharacterized protein LOC101259761 [Solanum lycopersicum]
9 Hb_003637_030 0.0456243603 - - -
10 Hb_007943_010 0.1032797417 - - -
11 Hb_012264_040 0.1322259073 - - -
12 Hb_135941_010 0.1438948665 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
13 Hb_133862_010 0.1472304731 - - hypothetical protein POPTR_0009s13360g [Populus trichocarpa]
14 Hb_001066_020 0.1629317646 - - PREDICTED: uncharacterized protein LOC104908874, partial [Beta vulgaris subsp. vulgaris]
15 Hb_005432_050 0.1853094169 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
16 Hb_125948_020 0.1986309722 - - phosphoinositide 5-phosphatase, putative [Ricinus communis]
17 Hb_038190_040 0.1998269845 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
18 Hb_003793_050 0.2085644671 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
19 Hb_008424_010 0.218558982 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_000016_010 0.2198282957 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]

Gene co-expression network

sample Hb_002708_010 Hb_002708_010 Hb_185830_100 Hb_185830_100 Hb_002708_010--Hb_185830_100 Hb_001863_210 Hb_001863_210 Hb_002708_010--Hb_001863_210 Hb_006387_010 Hb_006387_010 Hb_002708_010--Hb_006387_010 Hb_049827_010 Hb_049827_010 Hb_002708_010--Hb_049827_010 Hb_003392_010 Hb_003392_010 Hb_002708_010--Hb_003392_010 Hb_102355_010 Hb_102355_010 Hb_002708_010--Hb_102355_010 Hb_185830_100--Hb_001863_210 Hb_185830_100--Hb_006387_010 Hb_185830_100--Hb_049827_010 Hb_185830_100--Hb_003392_010 Hb_185830_100--Hb_102355_010 Hb_001863_210--Hb_006387_010 Hb_001863_210--Hb_049827_010 Hb_001863_210--Hb_003392_010 Hb_001863_210--Hb_102355_010 Hb_006387_010--Hb_049827_010 Hb_006387_010--Hb_003392_010 Hb_006387_010--Hb_102355_010 Hb_049827_010--Hb_003392_010 Hb_049827_010--Hb_102355_010 Hb_003392_010--Hb_102355_010 Hb_086484_010 Hb_086484_010 Hb_102355_010--Hb_086484_010 Hb_003637_030 Hb_003637_030 Hb_102355_010--Hb_003637_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0365188 0 0 0.0404604 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis