Hb_002725_070

Information

Type -
Description -
Location Contig2725: 140343-145149
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa005949mg
description hypothetical protein
nr
ID XP_007205222.1
description hypothetical protein PRUPE_ppa005949mg [Prunus persica]
swissprot
ID Q9SR22
description Pectin acetylesterase 5 OS=Arabidopsis thaliana GN=PAE5 PE=2 SV=1
trembl
ID M5VZ85
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005949mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28485: 140316-144982 , PASA_asmbl_28486: 140403-145110
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002725_070 0.0 - - hypothetical protein PRUPE_ppa005949mg [Prunus persica]
2 Hb_005295_040 0.0622784395 - - PREDICTED: polyadenylate-binding protein RBP47-like [Jatropha curcas]
3 Hb_042083_070 0.0649262151 - - Glycogen synthase kinase-3 beta, putative [Ricinus communis]
4 Hb_000814_090 0.0652669248 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002820_040 0.0665863494 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000078_100 0.070175543 - - PREDICTED: topless-related protein 4-like isoform X2 [Jatropha curcas]
7 Hb_117950_020 0.0730429741 desease resistance Gene Name: NB-ARC PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Jatropha curcas]
8 Hb_003384_030 0.0736442662 - - PREDICTED: eukaryotic translation initiation factor 2 subunit beta-like [Jatropha curcas]
9 Hb_000001_180 0.0743344991 - - PREDICTED: uncharacterized protein LOC105648978 [Jatropha curcas]
10 Hb_001431_070 0.0744167935 - - PREDICTED: large proline-rich protein bag6-like isoform X2 [Jatropha curcas]
11 Hb_000631_150 0.0748353078 - - PREDICTED: RNA polymerase-associated protein LEO1 [Jatropha curcas]
12 Hb_000003_790 0.0769545147 - - PREDICTED: nuclear poly(A) polymerase 4-like [Jatropha curcas]
13 Hb_004724_360 0.0773139862 - - OTU-like cysteine protease family protein [Populus trichocarpa]
14 Hb_000076_080 0.0780522877 - - PREDICTED: protein MOS2 [Jatropha curcas]
15 Hb_000849_100 0.0786411387 - - PREDICTED: uncharacterized protein LOC105644134 [Jatropha curcas]
16 Hb_005635_010 0.0786678256 - - PREDICTED: cleft lip and palate transmembrane protein 1 homolog [Jatropha curcas]
17 Hb_001504_160 0.0805297979 - - PREDICTED: nuclear pore complex protein NUP96 [Jatropha curcas]
18 Hb_000327_310 0.0809085806 - - PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 [Jatropha curcas]
19 Hb_000318_140 0.0811989715 - - Kinase superfamily protein isoform 2 [Theobroma cacao]
20 Hb_001019_170 0.0813163074 - - PREDICTED: uncharacterized protein LOC105639322 [Jatropha curcas]

Gene co-expression network

sample Hb_002725_070 Hb_002725_070 Hb_005295_040 Hb_005295_040 Hb_002725_070--Hb_005295_040 Hb_042083_070 Hb_042083_070 Hb_002725_070--Hb_042083_070 Hb_000814_090 Hb_000814_090 Hb_002725_070--Hb_000814_090 Hb_002820_040 Hb_002820_040 Hb_002725_070--Hb_002820_040 Hb_000078_100 Hb_000078_100 Hb_002725_070--Hb_000078_100 Hb_117950_020 Hb_117950_020 Hb_002725_070--Hb_117950_020 Hb_004724_360 Hb_004724_360 Hb_005295_040--Hb_004724_360 Hb_001975_020 Hb_001975_020 Hb_005295_040--Hb_001975_020 Hb_000367_290 Hb_000367_290 Hb_005295_040--Hb_000367_290 Hb_005635_010 Hb_005635_010 Hb_005295_040--Hb_005635_010 Hb_000327_310 Hb_000327_310 Hb_005295_040--Hb_000327_310 Hb_042083_070--Hb_005295_040 Hb_000462_150 Hb_000462_150 Hb_042083_070--Hb_000462_150 Hb_005914_230 Hb_005914_230 Hb_042083_070--Hb_005914_230 Hb_003384_030 Hb_003384_030 Hb_042083_070--Hb_003384_030 Hb_004310_060 Hb_004310_060 Hb_042083_070--Hb_004310_060 Hb_000814_090--Hb_005635_010 Hb_006913_040 Hb_006913_040 Hb_000814_090--Hb_006913_040 Hb_001019_170 Hb_001019_170 Hb_000814_090--Hb_001019_170 Hb_000814_090--Hb_000078_100 Hb_000814_090--Hb_002820_040 Hb_000318_140 Hb_000318_140 Hb_002820_040--Hb_000318_140 Hb_002820_040--Hb_006913_040 Hb_002820_040--Hb_000078_100 Hb_007416_310 Hb_007416_310 Hb_002820_040--Hb_007416_310 Hb_000645_150 Hb_000645_150 Hb_002820_040--Hb_000645_150 Hb_000078_100--Hb_117950_020 Hb_004608_020 Hb_004608_020 Hb_000078_100--Hb_004608_020 Hb_000631_150 Hb_000631_150 Hb_000078_100--Hb_000631_150 Hb_000078_100--Hb_005635_010 Hb_153547_010 Hb_153547_010 Hb_117950_020--Hb_153547_010 Hb_000317_440 Hb_000317_440 Hb_117950_020--Hb_000317_440 Hb_117950_020--Hb_000631_150 Hb_001431_070 Hb_001431_070 Hb_117950_020--Hb_001431_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
48.8796 26.6256 8.30869 8.57895 65.6539 68.1862
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
31.2435 14.6846 23.0583 20.7977 5.27402

CAGE analysis