Hb_002735_050

Information

Type -
Description -
Location Contig2735: 84812-87259
Sequence    

Annotation

kegg
ID rcu:RCOM_1720960
description hypothetical protein
nr
ID XP_012085122.1
description PREDICTED: thiamine-repressible mitochondrial transport protein THI74 isoform X1 [Jatropha curcas]
swissprot
ID Q03730
description Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1
trembl
ID A0A067JR84
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17555 PE=4 SV=1
Gene Ontology
ID GO:0016021
description thiamine-repressible mitochondrial transport protein thi74 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002735_050 0.0 - - PREDICTED: thiamine-repressible mitochondrial transport protein THI74 isoform X1 [Jatropha curcas]
2 Hb_003697_050 0.0823667023 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 13 [Jatropha curcas]
3 Hb_004935_060 0.0880679275 - - Uncharacterized protein isoform 2 [Theobroma cacao]
4 Hb_003141_070 0.0902661336 - - PREDICTED: probable protein phosphatase 2C 51 [Jatropha curcas]
5 Hb_002289_080 0.0934892375 - - hypothetical protein POPTR_0016s05590g [Populus trichocarpa]
6 Hb_002284_230 0.095634663 - - PREDICTED: uncharacterized protein At5g43822 [Jatropha curcas]
7 Hb_025098_010 0.1030367631 - - PREDICTED: protoheme IX farnesyltransferase, mitochondrial isoform X2 [Jatropha curcas]
8 Hb_086085_020 0.1088642164 - - Non-imprinted in Prader-Willi/Angelman syndrome region protein isoform 3 [Theobroma cacao]
9 Hb_001168_020 0.1097613248 - - PREDICTED: translation initiation factor eIF-2B subunit gamma [Jatropha curcas]
10 Hb_185255_010 0.1104498666 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 11-like [Jatropha curcas]
11 Hb_000140_280 0.1165685221 - - hypothetical protein B456_001G157900 [Gossypium raimondii]
12 Hb_001268_050 0.1174794758 - - translocon-associated protein, beta subunit precursor, putative [Ricinus communis]
13 Hb_001489_110 0.1180691129 - - PREDICTED: mitochondrial outer membrane protein porin of 36 kDa-like [Citrus sinensis]
14 Hb_002043_040 0.1184551432 - - PREDICTED: uncharacterized protein LOC105631509 [Jatropha curcas]
15 Hb_000310_090 0.1189520457 - - 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic [Jatropha curcas]
16 Hb_000136_100 0.120352861 - - PREDICTED: syntaxin-61 [Jatropha curcas]
17 Hb_003529_030 0.1204118698 - - Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]
18 Hb_002481_060 0.1211354868 - - PREDICTED: uncharacterized protein LOC105640851 [Jatropha curcas]
19 Hb_000258_240 0.1216808241 - - sur2 hydroxylase/desaturase, putative [Ricinus communis]
20 Hb_009787_030 0.1228717354 - - Prolactin regulatory element-binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002735_050 Hb_002735_050 Hb_003697_050 Hb_003697_050 Hb_002735_050--Hb_003697_050 Hb_004935_060 Hb_004935_060 Hb_002735_050--Hb_004935_060 Hb_003141_070 Hb_003141_070 Hb_002735_050--Hb_003141_070 Hb_002289_080 Hb_002289_080 Hb_002735_050--Hb_002289_080 Hb_002284_230 Hb_002284_230 Hb_002735_050--Hb_002284_230 Hb_025098_010 Hb_025098_010 Hb_002735_050--Hb_025098_010 Hb_003697_050--Hb_002284_230 Hb_001268_050 Hb_001268_050 Hb_003697_050--Hb_001268_050 Hb_003697_050--Hb_025098_010 Hb_001390_130 Hb_001390_130 Hb_003697_050--Hb_001390_130 Hb_094836_010 Hb_094836_010 Hb_003697_050--Hb_094836_010 Hb_004935_060--Hb_003141_070 Hb_005144_050 Hb_005144_050 Hb_004935_060--Hb_005144_050 Hb_004935_060--Hb_003697_050 Hb_004935_060--Hb_002289_080 Hb_004935_060--Hb_025098_010 Hb_002304_040 Hb_002304_040 Hb_003141_070--Hb_002304_040 Hb_003141_070--Hb_025098_010 Hb_003141_070--Hb_005144_050 Hb_003529_030 Hb_003529_030 Hb_003141_070--Hb_003529_030 Hb_001168_020 Hb_001168_020 Hb_002289_080--Hb_001168_020 Hb_000310_090 Hb_000310_090 Hb_002289_080--Hb_000310_090 Hb_002289_080--Hb_005144_050 Hb_025194_100 Hb_025194_100 Hb_002289_080--Hb_025194_100 Hb_006478_020 Hb_006478_020 Hb_002289_080--Hb_006478_020 Hb_002289_080--Hb_025098_010 Hb_019654_030 Hb_019654_030 Hb_002284_230--Hb_019654_030 Hb_000046_350 Hb_000046_350 Hb_002284_230--Hb_000046_350 Hb_002284_230--Hb_025098_010 Hb_003633_050 Hb_003633_050 Hb_002284_230--Hb_003633_050 Hb_003126_070 Hb_003126_070 Hb_002284_230--Hb_003126_070 Hb_185255_010 Hb_185255_010 Hb_025098_010--Hb_185255_010 Hb_025098_010--Hb_000310_090 Hb_001307_030 Hb_001307_030 Hb_025098_010--Hb_001307_030 Hb_025098_010--Hb_005144_050 Hb_008841_020 Hb_008841_020 Hb_025098_010--Hb_008841_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.42402 5.92675 3.67831 27.2689 6.82871 15.6823
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.6225 16.9058 12.0425 11.9918 13.9453

CAGE analysis