Hb_002737_070

Information

Type -
Description -
Location Contig2737: 141214-157936
Sequence    

Annotation

kegg
ID pop:POPTR_0013s14900g
description POPTRDRAFT_571859; hypothetical protein
nr
ID XP_012078660.1
description PREDICTED: phagocyte signaling-impaired protein [Jatropha curcas]
swissprot
ID Q14CX7
description N-alpha-acetyltransferase 25, NatB auxiliary subunit OS=Homo sapiens GN=NAA25 PE=1 SV=1
trembl
ID A0A067LEX2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17360 PE=4 SV=1
Gene Ontology
ID GO:0005515
description phagocyte signaling-impaired protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28572: 141458-151000 , PASA_asmbl_28573: 145750-151000 , PASA_asmbl_28574: 145750-151000 , PASA_asmbl_28575: 143055-150966 , PASA_asmbl_28578: 151744-154160 , PASA_asmbl_28579: 154323-156115 , PASA_asmbl_28580: 154323-155973
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002737_070 0.0 - - PREDICTED: phagocyte signaling-impaired protein [Jatropha curcas]
2 Hb_000062_430 0.0561051146 - - PREDICTED: uncharacterized protein LOC105644764 isoform X1 [Jatropha curcas]
3 Hb_000120_920 0.0838862395 - - poly(A) polymerase, putative [Ricinus communis]
4 Hb_165928_020 0.0926163581 - - PREDICTED: zinc finger protein VAR3, chloroplastic [Jatropha curcas]
5 Hb_013691_020 0.0991800506 - - transcription initiation factor iie, alpha subunit, putative [Ricinus communis]
6 Hb_000009_650 0.10012173 - - PREDICTED: ribosomal RNA small subunit methyltransferase nep-1 [Jatropha curcas]
7 Hb_000785_080 0.1007022915 - - PREDICTED: zinc finger CCCH domain-containing protein 13 [Jatropha curcas]
8 Hb_003010_020 0.1011235866 - - PREDICTED: probable inactive heme oxygenase 2, chloroplastic isoform X1 [Jatropha curcas]
9 Hb_033153_070 0.1020996549 - - PREDICTED: uncharacterized protein LOC105649606 isoform X1 [Jatropha curcas]
10 Hb_023386_040 0.1044410874 - - PREDICTED: chaperone protein dnaJ 13-like [Populus euphratica]
11 Hb_000521_120 0.1065092555 - - PREDICTED: cyclic pyranopterin monophosphate synthase, mitochondrial isoform X1 [Jatropha curcas]
12 Hb_001416_070 0.1069140924 - - oxidoreductase, putative [Ricinus communis]
13 Hb_004412_010 0.1081676739 - - -
14 Hb_006909_070 0.1090428034 - - ABC transporter family protein [Hevea brasiliensis]
15 Hb_000671_110 0.1091906342 - - hypothetical protein JCGZ_23794 [Jatropha curcas]
16 Hb_022693_120 0.1096367034 - - PREDICTED: serine/threonine-protein kinase rio2-like [Jatropha curcas]
17 Hb_000152_260 0.1113702814 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 1 [Jatropha curcas]
18 Hb_009222_010 0.1120231915 - - WD-repeat protein, putative [Ricinus communis]
19 Hb_003641_060 0.1129136353 - - PREDICTED: uncharacterized protein LOC105638019 [Jatropha curcas]
20 Hb_020000_020 0.1138774602 - - Troponin C, skeletal muscle, putative [Ricinus communis]

Gene co-expression network

sample Hb_002737_070 Hb_002737_070 Hb_000062_430 Hb_000062_430 Hb_002737_070--Hb_000062_430 Hb_000120_920 Hb_000120_920 Hb_002737_070--Hb_000120_920 Hb_165928_020 Hb_165928_020 Hb_002737_070--Hb_165928_020 Hb_013691_020 Hb_013691_020 Hb_002737_070--Hb_013691_020 Hb_000009_650 Hb_000009_650 Hb_002737_070--Hb_000009_650 Hb_000785_080 Hb_000785_080 Hb_002737_070--Hb_000785_080 Hb_000062_430--Hb_165928_020 Hb_000062_430--Hb_000120_920 Hb_004412_010 Hb_004412_010 Hb_000062_430--Hb_004412_010 Hb_004841_010 Hb_004841_010 Hb_000062_430--Hb_004841_010 Hb_000093_160 Hb_000093_160 Hb_000062_430--Hb_000093_160 Hb_000120_920--Hb_165928_020 Hb_023386_040 Hb_023386_040 Hb_000120_920--Hb_023386_040 Hb_000120_920--Hb_004412_010 Hb_003438_050 Hb_003438_050 Hb_000120_920--Hb_003438_050 Hb_003025_110 Hb_003025_110 Hb_000120_920--Hb_003025_110 Hb_165928_020--Hb_004841_010 Hb_023386_020 Hb_023386_020 Hb_165928_020--Hb_023386_020 Hb_016172_020 Hb_016172_020 Hb_165928_020--Hb_016172_020 Hb_165928_020--Hb_004412_010 Hb_013691_020--Hb_000062_430 Hb_000364_080 Hb_000364_080 Hb_013691_020--Hb_000364_080 Hb_002007_180 Hb_002007_180 Hb_013691_020--Hb_002007_180 Hb_000198_070 Hb_000198_070 Hb_013691_020--Hb_000198_070 Hb_005608_030 Hb_005608_030 Hb_013691_020--Hb_005608_030 Hb_002918_030 Hb_002918_030 Hb_000009_650--Hb_002918_030 Hb_011671_090 Hb_011671_090 Hb_000009_650--Hb_011671_090 Hb_000009_650--Hb_000062_430 Hb_001433_070 Hb_001433_070 Hb_000009_650--Hb_001433_070 Hb_000913_050 Hb_000913_050 Hb_000009_650--Hb_000913_050 Hb_003641_060 Hb_003641_060 Hb_000785_080--Hb_003641_060 Hb_004934_070 Hb_004934_070 Hb_000785_080--Hb_004934_070 Hb_000083_160 Hb_000083_160 Hb_000785_080--Hb_000083_160 Hb_003010_020 Hb_003010_020 Hb_000785_080--Hb_003010_020 Hb_000038_080 Hb_000038_080 Hb_000785_080--Hb_000038_080 Hb_004881_020 Hb_004881_020 Hb_000785_080--Hb_004881_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.3388 7.14446 8.27367 7.80152 9.10578 21.0925
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.52772 11.0005 3.76378 6.82225 7.63021

CAGE analysis