Hb_002741_030

Information

Type -
Description -
Location Contig2741: 66330-67419
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002741_030 0.0 - - -
2 Hb_001186_050 0.0850426956 - - -
3 Hb_145890_010 0.1187214773 - - unnamed protein product [Vitis vinifera]
4 Hb_010588_010 0.1848882156 - - -
5 Hb_000373_300 0.1948927724 - - hypothetical protein F775_20382 [Aegilops tauschii]
6 Hb_000275_010 0.2063704538 - - -
7 Hb_030765_010 0.2214068706 desease resistance Gene Name: ABC_tran PREDICTED: ABC transporter G family member 11-like isoform X1 [Solanum lycopersicum]
8 Hb_005222_020 0.2283386865 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
9 Hb_003992_110 0.2343537485 - - hypothetical protein VITISV_016971 [Vitis vinifera]
10 Hb_006922_040 0.248267365 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
11 Hb_000184_190 0.2512018064 - - hypothetical protein VITISV_016970 [Vitis vinifera]
12 Hb_001141_400 0.2519553507 - - hypothetical protein B456_007G2854002, partial [Gossypium raimondii]
13 Hb_000736_010 0.2526226061 - - PREDICTED: uncharacterized protein LOC105762083 [Gossypium raimondii]
14 Hb_109578_010 0.2529025776 - - conserved hypothetical protein [Ricinus communis]
15 Hb_081207_010 0.2590925755 - - hypothetical protein JCGZ_17195 [Jatropha curcas]
16 Hb_005199_010 0.2647085749 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004116_110 0.2655715321 - - hypothetical protein MTR_3g064100 [Medicago truncatula]
18 Hb_000922_180 0.2703175863 - - PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5 [Jatropha curcas]
19 Hb_002228_090 0.2736714231 - - hypothetical protein POPTR_0006s23560g [Populus trichocarpa]
20 Hb_000445_220 0.278539552 - - -

Gene co-expression network

sample Hb_002741_030 Hb_002741_030 Hb_001186_050 Hb_001186_050 Hb_002741_030--Hb_001186_050 Hb_145890_010 Hb_145890_010 Hb_002741_030--Hb_145890_010 Hb_010588_010 Hb_010588_010 Hb_002741_030--Hb_010588_010 Hb_000373_300 Hb_000373_300 Hb_002741_030--Hb_000373_300 Hb_000275_010 Hb_000275_010 Hb_002741_030--Hb_000275_010 Hb_030765_010 Hb_030765_010 Hb_002741_030--Hb_030765_010 Hb_001186_050--Hb_010588_010 Hb_001186_050--Hb_145890_010 Hb_001186_050--Hb_030765_010 Hb_001186_050--Hb_000275_010 Hb_001186_050--Hb_000373_300 Hb_012324_020 Hb_012324_020 Hb_145890_010--Hb_012324_020 Hb_094721_010 Hb_094721_010 Hb_145890_010--Hb_094721_010 Hb_005222_020 Hb_005222_020 Hb_145890_010--Hb_005222_020 Hb_000184_190 Hb_000184_190 Hb_145890_010--Hb_000184_190 Hb_036285_010 Hb_036285_010 Hb_010588_010--Hb_036285_010 Hb_168418_010 Hb_168418_010 Hb_010588_010--Hb_168418_010 Hb_002205_200 Hb_002205_200 Hb_010588_010--Hb_002205_200 Hb_174107_010 Hb_174107_010 Hb_010588_010--Hb_174107_010 Hb_001141_400 Hb_001141_400 Hb_000373_300--Hb_001141_400 Hb_002742_010 Hb_002742_010 Hb_000373_300--Hb_002742_010 Hb_000861_050 Hb_000861_050 Hb_000373_300--Hb_000861_050 Hb_001143_010 Hb_001143_010 Hb_000373_300--Hb_001143_010 Hb_159085_010 Hb_159085_010 Hb_000373_300--Hb_159085_010 Hb_005199_010 Hb_005199_010 Hb_000275_010--Hb_005199_010 Hb_109578_010 Hb_109578_010 Hb_000275_010--Hb_109578_010 Hb_000275_010--Hb_005222_020 Hb_000275_010--Hb_145890_010 Hb_000048_100 Hb_000048_100 Hb_030765_010--Hb_000048_100 Hb_188382_010 Hb_188382_010 Hb_030765_010--Hb_188382_010 Hb_000086_330 Hb_000086_330 Hb_030765_010--Hb_000086_330 Hb_000348_040 Hb_000348_040 Hb_030765_010--Hb_000348_040 Hb_000736_010 Hb_000736_010 Hb_030765_010--Hb_000736_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.36762 0 0 0 0 1.22605
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.21825 3.85004 0 0 0

CAGE analysis