Hb_002756_020

Information

Type transcription factor
Description TF Family: HB
Location Contig2756: 45385-52295
Sequence    

Annotation

kegg
ID rcu:RCOM_1156630
description bel1 homeotic protein, putative
nr
ID XP_002529855.1
description bel1 homeotic protein, putative [Ricinus communis]
swissprot
ID Q9LZM8
description BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana GN=BLH9 PE=1 SV=1
trembl
ID B9SV36
description Bel1 homeotic protein, putative OS=Ricinus communis GN=RCOM_1156630 PE=4 SV=1
Gene Ontology
ID GO:0003677
description bel1-like homeodomain protein 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28842: 45244-51910
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002756_020 0.0 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]
2 Hb_004429_070 0.0792460458 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas]
3 Hb_002290_040 0.0909250581 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000327_220 0.0967792414 - - PREDICTED: probable protein phosphatase 2C 38 [Jatropha curcas]
5 Hb_006816_450 0.1037970142 - - conserved hypothetical protein [Ricinus communis]
6 Hb_005614_050 0.1057258955 - - PREDICTED: aspartate aminotransferase, mitochondrial-like [Jatropha curcas]
7 Hb_003551_050 0.1137990818 - - PREDICTED: mitochondrial fission 1 protein A [Jatropha curcas]
8 Hb_007161_010 0.120156218 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105630404 isoform X1 [Jatropha curcas]
9 Hb_003147_050 0.1226331889 - - nucleic acid binding protein, putative [Ricinus communis]
10 Hb_001959_160 0.1241973045 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
11 Hb_000432_050 0.1253433582 - - GTP-binding protein typa/bipa, putative [Ricinus communis]
12 Hb_003943_030 0.1279711759 - - PREDICTED: pentatricopeptide repeat-containing protein At1g32415, mitochondrial [Jatropha curcas]
13 Hb_029510_040 0.1286570977 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330 [Vitis vinifera]
14 Hb_005188_090 0.1298717482 - - PREDICTED: phosphatidylinositol 4-kinase gamma 7-like [Jatropha curcas]
15 Hb_001538_140 0.1299277844 - - PREDICTED: PXMP2/4 family protein 4-like [Jatropha curcas]
16 Hb_004410_100 0.1303193487 transcription factor TF Family: Orphans PREDICTED: B-box zinc finger protein 21 [Jatropha curcas]
17 Hb_001159_080 0.133209307 - - hypothetical protein JCGZ_20745 [Jatropha curcas]
18 Hb_000562_040 0.1370051377 - - PREDICTED: auxin response factor 5 isoform X1 [Jatropha curcas]
19 Hb_007429_030 0.1373676354 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]
20 Hb_000161_150 0.1376674556 - - PREDICTED: protein argonaute 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_002756_020 Hb_002756_020 Hb_004429_070 Hb_004429_070 Hb_002756_020--Hb_004429_070 Hb_002290_040 Hb_002290_040 Hb_002756_020--Hb_002290_040 Hb_000327_220 Hb_000327_220 Hb_002756_020--Hb_000327_220 Hb_006816_450 Hb_006816_450 Hb_002756_020--Hb_006816_450 Hb_005614_050 Hb_005614_050 Hb_002756_020--Hb_005614_050 Hb_003551_050 Hb_003551_050 Hb_002756_020--Hb_003551_050 Hb_004429_070--Hb_002290_040 Hb_011360_080 Hb_011360_080 Hb_004429_070--Hb_011360_080 Hb_004324_050 Hb_004324_050 Hb_004429_070--Hb_004324_050 Hb_004429_070--Hb_000327_220 Hb_000141_030 Hb_000141_030 Hb_004429_070--Hb_000141_030 Hb_001959_160 Hb_001959_160 Hb_002290_040--Hb_001959_160 Hb_003147_050 Hb_003147_050 Hb_002290_040--Hb_003147_050 Hb_003943_030 Hb_003943_030 Hb_002290_040--Hb_003943_030 Hb_001153_220 Hb_001153_220 Hb_002290_040--Hb_001153_220 Hb_011030_020 Hb_011030_020 Hb_000327_220--Hb_011030_020 Hb_001159_080 Hb_001159_080 Hb_000327_220--Hb_001159_080 Hb_005224_010 Hb_005224_010 Hb_000327_220--Hb_005224_010 Hb_000327_220--Hb_003551_050 Hb_000789_220 Hb_000789_220 Hb_000327_220--Hb_000789_220 Hb_004410_100 Hb_004410_100 Hb_006816_450--Hb_004410_100 Hb_007161_010 Hb_007161_010 Hb_006816_450--Hb_007161_010 Hb_006816_450--Hb_001959_160 Hb_006816_450--Hb_002290_040 Hb_009314_010 Hb_009314_010 Hb_006816_450--Hb_009314_010 Hb_005614_050--Hb_007161_010 Hb_005614_050--Hb_003551_050 Hb_000363_200 Hb_000363_200 Hb_005614_050--Hb_000363_200 Hb_001538_140 Hb_001538_140 Hb_005614_050--Hb_001538_140 Hb_006594_020 Hb_006594_020 Hb_005614_050--Hb_006594_020 Hb_093458_050 Hb_093458_050 Hb_003551_050--Hb_093458_050 Hb_011953_020 Hb_011953_020 Hb_003551_050--Hb_011953_020 Hb_000976_360 Hb_000976_360 Hb_003551_050--Hb_000976_360 Hb_031862_110 Hb_031862_110 Hb_003551_050--Hb_031862_110 Hb_002603_160 Hb_002603_160 Hb_003551_050--Hb_002603_160 Hb_000753_130 Hb_000753_130 Hb_003551_050--Hb_000753_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.0408 9.99765 2.3215 10.3072 17.6112 20.482
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
41.1739 48.7767 115 27.1288 6.86989

CAGE analysis