Hb_002757_050

Information

Type -
Description -
Location Contig2757: 58443-61735
Sequence    

Annotation

kegg
ID pop:POPTR_0019s09920g
description POPTRDRAFT_914296; hypothetical protein
nr
ID XP_011008179.1
description PREDICTED: O-acyltransferase WSD1-like isoform X1 [Populus euphratica]
swissprot
ID Q93ZR6
description O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1
trembl
ID B9IQ85
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s09920g PE=4 SV=2
Gene Ontology
ID GO:0016746
description o-acyltransferase wsd1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002757_050 0.0 - - PREDICTED: O-acyltransferase WSD1-like isoform X1 [Populus euphratica]
2 Hb_000671_010 0.0116144754 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
3 Hb_011161_060 0.0148030731 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 2 protein [Jatropha curcas]
4 Hb_000205_290 0.0159273908 - - -
5 Hb_000720_010 0.0425651177 - - Lignin-forming anionic peroxidase precursor, putative [Ricinus communis]
6 Hb_000948_040 0.0437651112 - - PREDICTED: germin-like protein subfamily 1 member 13 [Jatropha curcas]
7 Hb_005066_010 0.0552524846 - - FAD-binding domain-containing family protein [Populus trichocarpa]
8 Hb_033865_020 0.0590972258 - - -
9 Hb_001213_010 0.0724205002 - - PREDICTED: laccase-7 [Jatropha curcas]
10 Hb_054102_010 0.078172859 - - abhydrolase domain containing, putative [Ricinus communis]
11 Hb_126535_010 0.0886385686 - - hypothetical protein JCGZ_09554 [Jatropha curcas]
12 Hb_001546_090 0.0898680414 transcription factor TF Family: MYB PREDICTED: transcription factor MYB114-like [Jatropha curcas]
13 Hb_006153_190 0.0899673791 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]
14 Hb_148383_010 0.0908719655 - - PREDICTED: protein YLS9 [Jatropha curcas]
15 Hb_124247_030 0.0961512271 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Jatropha curcas]
16 Hb_025490_030 0.0963861016 - - PREDICTED: uncharacterized protein LOC105629177 [Jatropha curcas]
17 Hb_009545_040 0.0968864004 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000576_080 0.1023633501 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001948_020 0.1084257206 - - -
20 Hb_177880_010 0.1163926795 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]

Gene co-expression network

sample Hb_002757_050 Hb_002757_050 Hb_000671_010 Hb_000671_010 Hb_002757_050--Hb_000671_010 Hb_011161_060 Hb_011161_060 Hb_002757_050--Hb_011161_060 Hb_000205_290 Hb_000205_290 Hb_002757_050--Hb_000205_290 Hb_000720_010 Hb_000720_010 Hb_002757_050--Hb_000720_010 Hb_000948_040 Hb_000948_040 Hb_002757_050--Hb_000948_040 Hb_005066_010 Hb_005066_010 Hb_002757_050--Hb_005066_010 Hb_000671_010--Hb_011161_060 Hb_000671_010--Hb_000205_290 Hb_000671_010--Hb_000720_010 Hb_000671_010--Hb_000948_040 Hb_001213_010 Hb_001213_010 Hb_000671_010--Hb_001213_010 Hb_011161_060--Hb_000720_010 Hb_011161_060--Hb_000205_290 Hb_011161_060--Hb_001213_010 Hb_011161_060--Hb_000948_040 Hb_000205_290--Hb_000948_040 Hb_000205_290--Hb_005066_010 Hb_033865_020 Hb_033865_020 Hb_000205_290--Hb_033865_020 Hb_000720_010--Hb_001213_010 Hb_054102_010 Hb_054102_010 Hb_000720_010--Hb_054102_010 Hb_148383_010 Hb_148383_010 Hb_000720_010--Hb_148383_010 Hb_000948_040--Hb_005066_010 Hb_000948_040--Hb_033865_020 Hb_001546_090 Hb_001546_090 Hb_000948_040--Hb_001546_090 Hb_005066_010--Hb_033865_020 Hb_005066_010--Hb_001546_090 Hb_001948_020 Hb_001948_020 Hb_005066_010--Hb_001948_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0199883 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.194776 0

CAGE analysis