Hb_002759_090

Information

Type -
Description -
Location Contig2759: 74187-78594
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002759_090 0.0 - - -
2 Hb_006816_270 0.2979627618 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005565_060 0.3038010435 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM50 isoform X1 [Jatropha curcas]
4 Hb_001343_010 0.304976496 - - -
5 Hb_000330_030 0.3089849261 - - PREDICTED: uncharacterized protein LOC105633814 [Jatropha curcas]
6 Hb_002506_090 0.3143796807 - - -
7 Hb_015941_050 0.3173871482 - - conserved hypothetical protein [Ricinus communis]
8 Hb_158104_020 0.3196023098 - - PREDICTED: coiled-coil domain-containing protein 12 [Jatropha curcas]
9 Hb_003673_040 0.321714845 - - dynamin family protein [Populus trichocarpa]
10 Hb_018279_020 0.3280031889 - - hypothetical protein JCGZ_03682 [Jatropha curcas]
11 Hb_067096_010 0.3300363244 - - PREDICTED: valine--tRNA ligase [Jatropha curcas]
12 Hb_000613_210 0.3305529118 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
13 Hb_008864_030 0.3307234138 - - -
14 Hb_005144_010 0.3310277746 - - PREDICTED: lactoylglutathione lyase [Jatropha curcas]
15 Hb_000856_060 0.3312612121 - - -
16 Hb_000003_720 0.3382184582 - - hypothetical protein POPTR_0003s04720g [Populus trichocarpa]
17 Hb_003996_030 0.3399355833 - - -
18 Hb_000002_250 0.3417315091 - - hypothetical protein JCGZ_02310 [Jatropha curcas]
19 Hb_009711_050 0.3418715558 - - hypothetical protein POPTR_0019s04500g [Populus trichocarpa]
20 Hb_000331_540 0.3437196932 - - hypothetical protein POPTR_0015s10070g, partial [Populus trichocarpa]

Gene co-expression network

sample Hb_002759_090 Hb_002759_090 Hb_006816_270 Hb_006816_270 Hb_002759_090--Hb_006816_270 Hb_005565_060 Hb_005565_060 Hb_002759_090--Hb_005565_060 Hb_001343_010 Hb_001343_010 Hb_002759_090--Hb_001343_010 Hb_000330_030 Hb_000330_030 Hb_002759_090--Hb_000330_030 Hb_002506_090 Hb_002506_090 Hb_002759_090--Hb_002506_090 Hb_015941_050 Hb_015941_050 Hb_002759_090--Hb_015941_050 Hb_000923_090 Hb_000923_090 Hb_006816_270--Hb_000923_090 Hb_000031_260 Hb_000031_260 Hb_006816_270--Hb_000031_260 Hb_116420_010 Hb_116420_010 Hb_006816_270--Hb_116420_010 Hb_001369_250 Hb_001369_250 Hb_006816_270--Hb_001369_250 Hb_001288_030 Hb_001288_030 Hb_006816_270--Hb_001288_030 Hb_000390_140 Hb_000390_140 Hb_006816_270--Hb_000390_140 Hb_019762_020 Hb_019762_020 Hb_005565_060--Hb_019762_020 Hb_001252_210 Hb_001252_210 Hb_005565_060--Hb_001252_210 Hb_003025_040 Hb_003025_040 Hb_005565_060--Hb_003025_040 Hb_002221_070 Hb_002221_070 Hb_005565_060--Hb_002221_070 Hb_002518_210 Hb_002518_210 Hb_005565_060--Hb_002518_210 Hb_024758_010 Hb_024758_010 Hb_005565_060--Hb_024758_010 Hb_001246_070 Hb_001246_070 Hb_001343_010--Hb_001246_070 Hb_000752_050 Hb_000752_050 Hb_001343_010--Hb_000752_050 Hb_010815_020 Hb_010815_020 Hb_001343_010--Hb_010815_020 Hb_003435_010 Hb_003435_010 Hb_001343_010--Hb_003435_010 Hb_001343_010--Hb_000330_030 Hb_003673_040 Hb_003673_040 Hb_000330_030--Hb_003673_040 Hb_001496_130 Hb_001496_130 Hb_000330_030--Hb_001496_130 Hb_012506_070 Hb_012506_070 Hb_000330_030--Hb_012506_070 Hb_000856_060 Hb_000856_060 Hb_000330_030--Hb_000856_060 Hb_000690_150 Hb_000690_150 Hb_000330_030--Hb_000690_150 Hb_050959_010 Hb_050959_010 Hb_000330_030--Hb_050959_010 Hb_000815_060 Hb_000815_060 Hb_002506_090--Hb_000815_060 Hb_150930_010 Hb_150930_010 Hb_002506_090--Hb_150930_010 Hb_002506_060 Hb_002506_060 Hb_002506_090--Hb_002506_060 Hb_002447_080 Hb_002447_080 Hb_002506_090--Hb_002447_080 Hb_000696_160 Hb_000696_160 Hb_002506_090--Hb_000696_160 Hb_000003_720 Hb_000003_720 Hb_002506_090--Hb_000003_720 Hb_002205_170 Hb_002205_170 Hb_015941_050--Hb_002205_170 Hb_005144_010 Hb_005144_010 Hb_015941_050--Hb_005144_010 Hb_001322_070 Hb_001322_070 Hb_015941_050--Hb_001322_070 Hb_001584_240 Hb_001584_240 Hb_015941_050--Hb_001584_240 Hb_008206_100 Hb_008206_100 Hb_015941_050--Hb_008206_100 Hb_000483_400 Hb_000483_400 Hb_015941_050--Hb_000483_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.269625 0.0705646 0 0.659806 0.131549 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.158655 0.623107 0 0.314191 0.227418

CAGE analysis