Hb_002760_060

Information

Type -
Description -
Location Contig2760: 84193-84813
Sequence    

Annotation

kegg
ID tcc:TCM_038230
description Serine-rich protein-related
nr
ID XP_012081129.1
description PREDICTED: uncharacterized protein LOC105641235 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KDB1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16982 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002760_060 0.0 - - PREDICTED: uncharacterized protein LOC105641235 [Jatropha curcas]
2 Hb_033153_010 0.1042494167 - - PREDICTED: MLO-like protein 12 [Jatropha curcas]
3 Hb_000414_100 0.1350423971 - - PREDICTED: uncharacterized protein LOC105643784 [Jatropha curcas]
4 Hb_174829_040 0.146747653 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]
5 Hb_001277_150 0.1483644936 - - hypothetical protein VITISV_043492 [Vitis vinifera]
6 Hb_001514_040 0.1494073993 - - l-asparaginase, putative [Ricinus communis]
7 Hb_011671_290 0.1526702503 transcription factor TF Family: ERF hypothetical protein JCGZ_26299 [Jatropha curcas]
8 Hb_000563_460 0.1531952981 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
9 Hb_003442_050 0.1584123305 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
10 Hb_008931_020 0.160319259 - - Receptor like protein 46, putative [Theobroma cacao]
11 Hb_013057_030 0.1627112745 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001437_200 0.1636809986 - - PREDICTED: UDP-glycosyltransferase 86A2 [Jatropha curcas]
13 Hb_003053_060 0.1647295936 - - PREDICTED: uncharacterized protein LOC105641515 [Jatropha curcas]
14 Hb_002311_490 0.1648652844 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
15 Hb_001405_260 0.1659240163 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
16 Hb_007850_050 0.1674926478 - - flavonoid 3-hydroxylase, putative [Ricinus communis]
17 Hb_116349_050 0.1678878727 - - formin homology 2 domain-containing family protein [Populus trichocarpa]
18 Hb_000039_100 0.1697904678 - - PREDICTED: uncharacterized protein LOC105649440 [Jatropha curcas]
19 Hb_005648_030 0.1705464697 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH18-like [Jatropha curcas]
20 Hb_000336_160 0.1708506624 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002760_060 Hb_002760_060 Hb_033153_010 Hb_033153_010 Hb_002760_060--Hb_033153_010 Hb_000414_100 Hb_000414_100 Hb_002760_060--Hb_000414_100 Hb_174829_040 Hb_174829_040 Hb_002760_060--Hb_174829_040 Hb_001277_150 Hb_001277_150 Hb_002760_060--Hb_001277_150 Hb_001514_040 Hb_001514_040 Hb_002760_060--Hb_001514_040 Hb_011671_290 Hb_011671_290 Hb_002760_060--Hb_011671_290 Hb_033153_010--Hb_000414_100 Hb_005648_030 Hb_005648_030 Hb_033153_010--Hb_005648_030 Hb_001405_260 Hb_001405_260 Hb_033153_010--Hb_001405_260 Hb_005588_010 Hb_005588_010 Hb_033153_010--Hb_005588_010 Hb_007850_050 Hb_007850_050 Hb_033153_010--Hb_007850_050 Hb_000414_100--Hb_011671_290 Hb_000414_100--Hb_174829_040 Hb_116349_050 Hb_116349_050 Hb_000414_100--Hb_116349_050 Hb_001437_200 Hb_001437_200 Hb_000414_100--Hb_001437_200 Hb_002572_060 Hb_002572_060 Hb_000414_100--Hb_002572_060 Hb_000142_010 Hb_000142_010 Hb_174829_040--Hb_000142_010 Hb_002042_190 Hb_002042_190 Hb_174829_040--Hb_002042_190 Hb_174829_040--Hb_116349_050 Hb_002311_490 Hb_002311_490 Hb_174829_040--Hb_002311_490 Hb_000172_300 Hb_000172_300 Hb_174829_040--Hb_000172_300 Hb_059580_010 Hb_059580_010 Hb_001277_150--Hb_059580_010 Hb_001277_150--Hb_033153_010 Hb_000215_120 Hb_000215_120 Hb_001277_150--Hb_000215_120 Hb_001985_010 Hb_001985_010 Hb_001277_150--Hb_001985_010 Hb_001277_150--Hb_005648_030 Hb_001922_160 Hb_001922_160 Hb_001514_040--Hb_001922_160 Hb_003442_050 Hb_003442_050 Hb_001514_040--Hb_003442_050 Hb_013057_030 Hb_013057_030 Hb_001514_040--Hb_013057_030 Hb_048653_040 Hb_048653_040 Hb_001514_040--Hb_048653_040 Hb_001514_040--Hb_033153_010 Hb_000610_030 Hb_000610_030 Hb_011671_290--Hb_000610_030 Hb_011671_290--Hb_002572_060 Hb_008931_020 Hb_008931_020 Hb_011671_290--Hb_008931_020 Hb_000959_290 Hb_000959_290 Hb_011671_290--Hb_000959_290 Hb_004994_070 Hb_004994_070 Hb_011671_290--Hb_004994_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
34.6996 1741.5 59.3769 68.1717 17.1925 19.8631
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.03104 22.6305 6.62933 41.6495 25.8313

CAGE analysis