Hb_002762_090

Information

Type -
Description -
Location Contig2762: 101317-104825
Sequence    

Annotation

kegg
ID rcu:RCOM_1510300
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.30)
nr
ID XP_002511372.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q9LMB9
description Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2
trembl
ID B9RAZ7
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_1510300 PE=4 SV=1
Gene Ontology
ID GO:0004672
description cysteine-rich receptor-like protein kinase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002762_090 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_116478_010 0.1766091481 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF003-like [Jatropha curcas]
3 Hb_000300_590 0.1890889501 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curcas]
4 Hb_001758_120 0.198247486 - - unnamed protein product [Vitis vinifera]
5 Hb_025254_020 0.2048912989 - - PREDICTED: formate dehydrogenase, mitochondrial [Vitis vinifera]
6 Hb_002475_070 0.2078274471 - - hypothetical protein POPTR_0017s02440g, partial [Populus trichocarpa]
7 Hb_002016_020 0.2086508935 - - RALFL33, putative [Ricinus communis]
8 Hb_000032_560 0.2093619499 - - hypothetical protein JCGZ_15037 [Jatropha curcas]
9 Hb_001104_200 0.2110950233 - - Phytosulfokine 3 precursor, putative [Theobroma cacao]
10 Hb_001148_050 0.216183031 - - -
11 Hb_159015_010 0.2172985092 - - receptor protein kinase, putative [Ricinus communis]
12 Hb_000589_210 0.2173617125 - - PREDICTED: uncharacterized protein LOC105647439 [Jatropha curcas]
13 Hb_135811_040 0.2177436922 - - conserved hypothetical protein [Ricinus communis]
14 Hb_036069_020 0.2182751663 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
15 Hb_000580_070 0.2189716587 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
16 Hb_008226_020 0.2191766325 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
17 Hb_005144_180 0.2197370164 - - PREDICTED: protein enabled homolog [Populus euphratica]
18 Hb_000911_050 0.2248777087 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 21 [Jatropha curcas]
19 Hb_011452_020 0.2255077594 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 4 [Jatropha curcas]
20 Hb_000116_550 0.2273331799 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002762_090 Hb_002762_090 Hb_116478_010 Hb_116478_010 Hb_002762_090--Hb_116478_010 Hb_000300_590 Hb_000300_590 Hb_002762_090--Hb_000300_590 Hb_001758_120 Hb_001758_120 Hb_002762_090--Hb_001758_120 Hb_025254_020 Hb_025254_020 Hb_002762_090--Hb_025254_020 Hb_002475_070 Hb_002475_070 Hb_002762_090--Hb_002475_070 Hb_002016_020 Hb_002016_020 Hb_002762_090--Hb_002016_020 Hb_159015_010 Hb_159015_010 Hb_116478_010--Hb_159015_010 Hb_005064_040 Hb_005064_040 Hb_116478_010--Hb_005064_040 Hb_002182_050 Hb_002182_050 Hb_116478_010--Hb_002182_050 Hb_000497_120 Hb_000497_120 Hb_116478_010--Hb_000497_120 Hb_000032_560 Hb_000032_560 Hb_116478_010--Hb_000032_560 Hb_006120_010 Hb_006120_010 Hb_116478_010--Hb_006120_010 Hb_003602_070 Hb_003602_070 Hb_000300_590--Hb_003602_070 Hb_000300_590--Hb_116478_010 Hb_032225_040 Hb_032225_040 Hb_000300_590--Hb_032225_040 Hb_000300_590--Hb_000032_560 Hb_000580_070 Hb_000580_070 Hb_000300_590--Hb_000580_070 Hb_006637_040 Hb_006637_040 Hb_001758_120--Hb_006637_040 Hb_003893_100 Hb_003893_100 Hb_001758_120--Hb_003893_100 Hb_000797_030 Hb_000797_030 Hb_001758_120--Hb_000797_030 Hb_002749_070 Hb_002749_070 Hb_001758_120--Hb_002749_070 Hb_003097_200 Hb_003097_200 Hb_001758_120--Hb_003097_200 Hb_164283_010 Hb_164283_010 Hb_001758_120--Hb_164283_010 Hb_000099_020 Hb_000099_020 Hb_025254_020--Hb_000099_020 Hb_001959_030 Hb_001959_030 Hb_025254_020--Hb_001959_030 Hb_018133_110 Hb_018133_110 Hb_025254_020--Hb_018133_110 Hb_002042_200 Hb_002042_200 Hb_025254_020--Hb_002042_200 Hb_025254_020--Hb_000032_560 Hb_025254_020--Hb_002016_020 Hb_144783_010 Hb_144783_010 Hb_002475_070--Hb_144783_010 Hb_002475_070--Hb_003893_100 Hb_000297_180 Hb_000297_180 Hb_002475_070--Hb_000297_180 Hb_004316_130 Hb_004316_130 Hb_002475_070--Hb_004316_130 Hb_002475_070--Hb_000797_030 Hb_002521_010 Hb_002521_010 Hb_002475_070--Hb_002521_010 Hb_001369_620 Hb_001369_620 Hb_002016_020--Hb_001369_620 Hb_135811_040 Hb_135811_040 Hb_002016_020--Hb_135811_040 Hb_002016_020--Hb_000032_560 Hb_002016_020--Hb_001959_030 Hb_002597_010 Hb_002597_010 Hb_002016_020--Hb_002597_010 Hb_002016_020--Hb_000580_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0267048 0.0699201 0.0106509 0.486249 0.0619775 0.0394523
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0489458 0.0128385 0 1.49301 0.109334

CAGE analysis