Hb_002774_110

Information

Type -
Description -
Location Contig2774: 93498-96957
Sequence    

Annotation

kegg
ID rcu:RCOM_1034910
description heat shock protein binding protein, putative
nr
ID XP_002513903.1
description heat shock protein binding protein, putative [Ricinus communis]
swissprot
ID Q9MAH1
description TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana GN=TTL1 PE=1 SV=1
trembl
ID B9RJI4
description Heat shock protein binding protein, putative OS=Ricinus communis GN=RCOM_1034910 PE=4 SV=1
Gene Ontology
ID GO:0005623
description tpr repeat-containing thioredoxin ttl1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002774_110 0.0 - - heat shock protein binding protein, putative [Ricinus communis]
2 Hb_002783_110 0.1823213778 - - Zeamatin precursor, putative [Ricinus communis]
3 Hb_005144_110 0.1841956585 - - PREDICTED: uncharacterized protein LOC104455487 [Eucalyptus grandis]
4 Hb_000059_010 0.1846841297 - - amino acid binding protein, putative [Ricinus communis]
5 Hb_001604_150 0.1864884398 - - PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Nelumbo nucifera]
6 Hb_000614_170 0.1913689827 - - Glyceraldehyde-3-phosphate dehydrogenase-2C cytosolic [Gossypium arboreum]
7 Hb_001102_210 0.1954282894 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like isoform X1 [Jatropha curcas]
8 Hb_006538_190 0.2007174607 - - PREDICTED: homocysteine S-methyltransferase 1 isoform X1 [Jatropha curcas]
9 Hb_017170_030 0.2010228105 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
10 Hb_029385_010 0.2011307407 - - CTP synthase family protein [Populus trichocarpa]
11 Hb_000140_360 0.2045057242 - - PREDICTED: uncharacterized protein LOC105642906 [Jatropha curcas]
12 Hb_011609_090 0.2052405095 - - protein with unknown function [Ricinus communis]
13 Hb_000260_620 0.2057976275 - - Thermosensitive gluconokinase, putative [Ricinus communis]
14 Hb_000815_290 0.2071833095 - - PREDICTED: uncharacterized protein At1g04910 isoform X2 [Jatropha curcas]
15 Hb_130719_010 0.2137596331 - - V-type proton ATPase subunit E [Hevea brasiliensis]
16 Hb_022250_020 0.2141411678 - - PREDICTED: uncharacterized protein LOC105648703 [Jatropha curcas]
17 Hb_005054_260 0.2145993848 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 7 homolog A [Jatropha curcas]
18 Hb_001171_050 0.2150543723 - - PREDICTED: uncharacterized protein DDB_G0284459 [Jatropha curcas]
19 Hb_000771_060 0.2169159583 - - PREDICTED: spermine synthase [Jatropha curcas]
20 Hb_002291_010 0.2215994646 - - ring finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002774_110 Hb_002774_110 Hb_002783_110 Hb_002783_110 Hb_002774_110--Hb_002783_110 Hb_005144_110 Hb_005144_110 Hb_002774_110--Hb_005144_110 Hb_000059_010 Hb_000059_010 Hb_002774_110--Hb_000059_010 Hb_001604_150 Hb_001604_150 Hb_002774_110--Hb_001604_150 Hb_000614_170 Hb_000614_170 Hb_002774_110--Hb_000614_170 Hb_001102_210 Hb_001102_210 Hb_002774_110--Hb_001102_210 Hb_029385_010 Hb_029385_010 Hb_002783_110--Hb_029385_010 Hb_026889_040 Hb_026889_040 Hb_002783_110--Hb_026889_040 Hb_000771_060 Hb_000771_060 Hb_002783_110--Hb_000771_060 Hb_002217_100 Hb_002217_100 Hb_002783_110--Hb_002217_100 Hb_130719_010 Hb_130719_010 Hb_002783_110--Hb_130719_010 Hb_028049_010 Hb_028049_010 Hb_002783_110--Hb_028049_010 Hb_005144_110--Hb_000059_010 Hb_000140_360 Hb_000140_360 Hb_005144_110--Hb_000140_360 Hb_000815_290 Hb_000815_290 Hb_005144_110--Hb_000815_290 Hb_001171_050 Hb_001171_050 Hb_005144_110--Hb_001171_050 Hb_005054_270 Hb_005054_270 Hb_005144_110--Hb_005054_270 Hb_000059_010--Hb_000815_290 Hb_000059_010--Hb_001102_210 Hb_000059_010--Hb_130719_010 Hb_002078_440 Hb_002078_440 Hb_000059_010--Hb_002078_440 Hb_001377_420 Hb_001377_420 Hb_000059_010--Hb_001377_420 Hb_000059_010--Hb_000771_060 Hb_002307_310 Hb_002307_310 Hb_001604_150--Hb_002307_310 Hb_031910_020 Hb_031910_020 Hb_001604_150--Hb_031910_020 Hb_002631_180 Hb_002631_180 Hb_001604_150--Hb_002631_180 Hb_000215_360 Hb_000215_360 Hb_001604_150--Hb_000215_360 Hb_000009_050 Hb_000009_050 Hb_001604_150--Hb_000009_050 Hb_004429_020 Hb_004429_020 Hb_001604_150--Hb_004429_020 Hb_001699_200 Hb_001699_200 Hb_000614_170--Hb_001699_200 Hb_001332_040 Hb_001332_040 Hb_000614_170--Hb_001332_040 Hb_002217_230 Hb_002217_230 Hb_000614_170--Hb_002217_230 Hb_017170_030 Hb_017170_030 Hb_000614_170--Hb_017170_030 Hb_028487_170 Hb_028487_170 Hb_000614_170--Hb_028487_170 Hb_000614_170--Hb_029385_010 Hb_001102_210--Hb_002078_440 Hb_013405_140 Hb_013405_140 Hb_001102_210--Hb_013405_140 Hb_001102_210--Hb_000140_360 Hb_000340_310 Hb_000340_310 Hb_001102_210--Hb_000340_310 Hb_001102_210--Hb_000815_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0435895 0.0945196 0.177545 0.184932 0.00864744 0.00808134
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0839414 0.511881 0.501855 0.512098 0.244731

CAGE analysis