Hb_002804_070

Information

Type -
Description -
Location Contig2804: 101137-103160
Sequence    

Annotation

kegg
ID rcu:RCOM_1238330
description Stearoy-ACP desaturase (EC:1.14.19.2)
nr
ID KDP44234.1
description hypothetical protein JCGZ_05701 [Jatropha curcas]
swissprot
ID P22337
description Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Ricinus communis PE=1 SV=1
trembl
ID A0A067LJ27
description Acyl-[acyl-carrier-protein] desaturase OS=Jatropha curcas GN=JCGZ_05701 PE=3 SV=1
Gene Ontology
ID GO:0045300
description stearoyl-acp desaturase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29274: 102584-103272
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002804_070 0.0 - - hypothetical protein JCGZ_05701 [Jatropha curcas]
2 Hb_001953_010 0.0625728429 - - PREDICTED: bidirectional sugar transporter SWEET10-like [Jatropha curcas]
3 Hb_004374_170 0.0674075115 - - PREDICTED: gibberellin 20 oxidase 1-B [Jatropha curcas]
4 Hb_005946_200 0.0756343396 - - hypothetical protein POPTR_0006s16210g [Populus trichocarpa]
5 Hb_000120_600 0.0780094117 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
6 Hb_002303_050 0.0797073343 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor PTL-like [Populus euphratica]
7 Hb_004474_070 0.0841872126 desease resistance Gene Name: NB-ARC Disease resistance protein RPP8, putative [Ricinus communis]
8 Hb_001221_050 0.0867613677 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Jatropha curcas]
9 Hb_003427_020 0.0893699892 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
10 Hb_128216_010 0.0925460837 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
11 Hb_001022_070 0.0948888678 - - cell wall invertase [Manihot esculenta]
12 Hb_000000_320 0.0979525511 - - PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
13 Hb_006951_010 0.0998857087 - - PREDICTED: ubiquitin-conjugating enzyme E2 10-like [Populus euphratica]
14 Hb_001856_130 0.1082585849 - - hypothetical protein CISIN_1g022795mg [Citrus sinensis]
15 Hb_017549_010 0.1146165124 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00222 [Jatropha curcas]
16 Hb_112145_010 0.1151425202 - - kinase, putative [Ricinus communis]
17 Hb_002186_030 0.1163785955 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X1 [Populus euphratica]
18 Hb_000020_210 0.1180142585 - - hypothetical protein JCGZ_17348 [Jatropha curcas]
19 Hb_153180_010 0.1197287632 - - NBS-LRR disease resistance protein NBS49 [Dimocarpus longan]
20 Hb_001675_350 0.1217438851 - - Avr9/Cf-9 rapidly elicited protein [Jatropha curcas]

Gene co-expression network

sample Hb_002804_070 Hb_002804_070 Hb_001953_010 Hb_001953_010 Hb_002804_070--Hb_001953_010 Hb_004374_170 Hb_004374_170 Hb_002804_070--Hb_004374_170 Hb_005946_200 Hb_005946_200 Hb_002804_070--Hb_005946_200 Hb_000120_600 Hb_000120_600 Hb_002804_070--Hb_000120_600 Hb_002303_050 Hb_002303_050 Hb_002804_070--Hb_002303_050 Hb_004474_070 Hb_004474_070 Hb_002804_070--Hb_004474_070 Hb_001953_010--Hb_004474_070 Hb_000000_320 Hb_000000_320 Hb_001953_010--Hb_000000_320 Hb_001953_010--Hb_002303_050 Hb_001022_070 Hb_001022_070 Hb_001953_010--Hb_001022_070 Hb_128216_010 Hb_128216_010 Hb_001953_010--Hb_128216_010 Hb_006951_010 Hb_006951_010 Hb_004374_170--Hb_006951_010 Hb_004374_170--Hb_001953_010 Hb_004374_170--Hb_000120_600 Hb_017549_010 Hb_017549_010 Hb_004374_170--Hb_017549_010 Hb_004374_170--Hb_005946_200 Hb_001221_050 Hb_001221_050 Hb_005946_200--Hb_001221_050 Hb_005946_200--Hb_002303_050 Hb_006153_020 Hb_006153_020 Hb_005946_200--Hb_006153_020 Hb_005946_200--Hb_001022_070 Hb_002811_320 Hb_002811_320 Hb_005946_200--Hb_002811_320 Hb_001856_130 Hb_001856_130 Hb_000120_600--Hb_001856_130 Hb_000120_600--Hb_001953_010 Hb_000120_600--Hb_017549_010 Hb_000120_600--Hb_004474_070 Hb_002303_050--Hb_004474_070 Hb_001675_350 Hb_001675_350 Hb_002303_050--Hb_001675_350 Hb_002303_050--Hb_128216_010 Hb_004474_070--Hb_128216_010 Hb_004474_070--Hb_001675_350 Hb_000139_390 Hb_000139_390 Hb_004474_070--Hb_000139_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0384447 4.50747 2.9989 8.64261 0.0192756 0.0169059
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.138645 1.35391

CAGE analysis