Hb_002805_280

Information

Type -
Description -
Location Contig2805: 234502-236931
Sequence    

Annotation

kegg
ID rcu:RCOM_0911690
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012088637.1
description PREDICTED: sugar transport protein 14-like [Jatropha curcas]
swissprot
ID Q8GW61
description Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2
trembl
ID A0A067JM11
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27127 PE=3 SV=1
Gene Ontology
ID GO:0005886
description sugar transport protein 14-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29309: 235317-235747 , PASA_asmbl_29311: 236058-236946
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002805_280 0.0 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
2 Hb_002387_010 0.0462355998 - - PREDICTED: protein STAY-GREEN LIKE, chloroplastic [Jatropha curcas]
3 Hb_008195_090 0.0652473759 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002042_210 0.0731043009 - - PREDICTED: UPF0603 protein At1g54780, chloroplastic [Jatropha curcas]
5 Hb_003090_240 0.0734792433 - - hypothetical protein JCGZ_25095 [Jatropha curcas]
6 Hb_004607_110 0.0820125416 - - PREDICTED: serine/threonine-protein kinase Nek6 [Jatropha curcas]
7 Hb_029991_010 0.0850434649 - - hypothetical protein PRUPE_ppa001615mg [Prunus persica]
8 Hb_006291_050 0.0886061642 - - PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial isoform X1 [Jatropha curcas]
9 Hb_131466_010 0.0890473726 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
10 Hb_003151_020 0.0926413391 - - Ankyrin repeat family protein, putative [Theobroma cacao]
11 Hb_000477_090 0.093380442 - - PREDICTED: uncharacterized protein LOC105639302 [Jatropha curcas]
12 Hb_044478_010 0.0947839513 - - plastoquinol-plastocyanin reductase, putative [Ricinus communis]
13 Hb_006573_240 0.0953515625 - - PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
14 Hb_003913_120 0.1009193411 transcription factor TF Family: MYB hypothetical protein POPTR_0015s09430g [Populus trichocarpa]
15 Hb_000268_050 0.1012351189 - - PREDICTED: tetrapyrrole-binding protein, chloroplastic [Jatropha curcas]
16 Hb_004563_010 0.1012498042 - - ankyrin repeat-containing protein, putative [Ricinus communis]
17 Hb_028491_010 0.1013683036 - - hypothetical protein JCGZ_12857 [Jatropha curcas]
18 Hb_000139_360 0.1021833501 - - PREDICTED: uncharacterized protein LOC105631933 [Jatropha curcas]
19 Hb_002329_050 0.1031878405 - - conserved hypothetical protein [Ricinus communis]
20 Hb_003787_030 0.1039788762 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002805_280 Hb_002805_280 Hb_002387_010 Hb_002387_010 Hb_002805_280--Hb_002387_010 Hb_008195_090 Hb_008195_090 Hb_002805_280--Hb_008195_090 Hb_002042_210 Hb_002042_210 Hb_002805_280--Hb_002042_210 Hb_003090_240 Hb_003090_240 Hb_002805_280--Hb_003090_240 Hb_004607_110 Hb_004607_110 Hb_002805_280--Hb_004607_110 Hb_029991_010 Hb_029991_010 Hb_002805_280--Hb_029991_010 Hb_002387_010--Hb_004607_110 Hb_002387_010--Hb_008195_090 Hb_044478_010 Hb_044478_010 Hb_002387_010--Hb_044478_010 Hb_002387_010--Hb_029991_010 Hb_003913_120 Hb_003913_120 Hb_002387_010--Hb_003913_120 Hb_003151_020 Hb_003151_020 Hb_008195_090--Hb_003151_020 Hb_004563_010 Hb_004563_010 Hb_008195_090--Hb_004563_010 Hb_008195_090--Hb_029991_010 Hb_033681_030 Hb_033681_030 Hb_008195_090--Hb_033681_030 Hb_131466_010 Hb_131466_010 Hb_002042_210--Hb_131466_010 Hb_002042_210--Hb_044478_010 Hb_006291_050 Hb_006291_050 Hb_002042_210--Hb_006291_050 Hb_003033_020 Hb_003033_020 Hb_002042_210--Hb_003033_020 Hb_005111_040 Hb_005111_040 Hb_002042_210--Hb_005111_040 Hb_003090_240--Hb_002387_010 Hb_003090_240--Hb_002042_210 Hb_000739_280 Hb_000739_280 Hb_003090_240--Hb_000739_280 Hb_003090_240--Hb_008195_090 Hb_003090_240--Hb_006291_050 Hb_028491_010 Hb_028491_010 Hb_004607_110--Hb_028491_010 Hb_004607_110--Hb_029991_010 Hb_001141_100 Hb_001141_100 Hb_004607_110--Hb_001141_100 Hb_004607_110--Hb_131466_010 Hb_001735_040 Hb_001735_040 Hb_004607_110--Hb_001735_040 Hb_000803_080 Hb_000803_080 Hb_004607_110--Hb_000803_080 Hb_029991_010--Hb_131466_010 Hb_001307_050 Hb_001307_050 Hb_029991_010--Hb_001307_050 Hb_029991_010--Hb_028491_010 Hb_000179_010 Hb_000179_010 Hb_029991_010--Hb_000179_010 Hb_000497_050 Hb_000497_050 Hb_029991_010--Hb_000497_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.177301 3.60322 4.69032 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0738939 0.0775201 0.0366692 0.131177 11.0316

CAGE analysis