Hb_002809_040

Information

Type -
Description -
Location Contig2809: 36748-37674
Sequence    

Annotation

kegg
ID rcu:RCOM_1682510
description hypothetical protein
nr
ID XP_002509678.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RBZ4
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1682510 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002809_040 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001623_560 0.100713303 - - late embryogenesis abundant protein group 9 protein [Arachis hypogaea]
3 Hb_009662_040 0.1069026433 - - PREDICTED: uncharacterized protein LOC105114791 [Populus euphratica]
4 Hb_009062_020 0.1129740348 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis melo]
5 Hb_140627_040 0.1130466715 - - PREDICTED: vesicle-associated protein 4-1-like [Jatropha curcas]
6 Hb_000934_120 0.1186823168 - - PREDICTED: tumor necrosis factor ligand superfamily member 6 [Populus euphratica]
7 Hb_000796_110 0.1222337314 - - PREDICTED: probable pectinesterase 53 [Populus euphratica]
8 Hb_051212_020 0.1245253632 - - PREDICTED: 24-methylenesterol C-methyltransferase 2-like [Jatropha curcas]
9 Hb_016911_010 0.1256117762 - - hypothetical protein POPTR_0010s15010g [Populus trichocarpa]
10 Hb_003197_050 0.126649706 - - hypothetical protein JCGZ_04279 [Jatropha curcas]
11 Hb_034713_010 0.1269876724 - - PREDICTED: uncharacterized protein LOC105133378 [Populus euphratica]
12 Hb_002686_220 0.1282392327 - - PREDICTED: expansin-A15-like [Jatropha curcas]
13 Hb_002999_020 0.1287767004 - - PREDICTED: ribonuclease 3-like [Jatropha curcas]
14 Hb_000666_040 0.1290165157 - - PREDICTED: MLP-like protein 34 [Vitis vinifera]
15 Hb_153258_030 0.1298134988 - - hypothetical protein RCOM_0853150 [Ricinus communis]
16 Hb_136944_010 0.131908562 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
17 Hb_002228_120 0.1326051266 - - potassium channel beta, putative [Ricinus communis]
18 Hb_001496_150 0.13487997 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
19 Hb_000413_120 0.1350481598 - - PREDICTED: BTB/POZ domain-containing protein At3g22104-like [Jatropha curcas]
20 Hb_000497_080 0.135484476 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002809_040 Hb_002809_040 Hb_001623_560 Hb_001623_560 Hb_002809_040--Hb_001623_560 Hb_009662_040 Hb_009662_040 Hb_002809_040--Hb_009662_040 Hb_009062_020 Hb_009062_020 Hb_002809_040--Hb_009062_020 Hb_140627_040 Hb_140627_040 Hb_002809_040--Hb_140627_040 Hb_000934_120 Hb_000934_120 Hb_002809_040--Hb_000934_120 Hb_000796_110 Hb_000796_110 Hb_002809_040--Hb_000796_110 Hb_000666_040 Hb_000666_040 Hb_001623_560--Hb_000666_040 Hb_016734_110 Hb_016734_110 Hb_001623_560--Hb_016734_110 Hb_001775_140 Hb_001775_140 Hb_001623_560--Hb_001775_140 Hb_001623_560--Hb_009662_040 Hb_000742_040 Hb_000742_040 Hb_001623_560--Hb_000742_040 Hb_002999_020 Hb_002999_020 Hb_001623_560--Hb_002999_020 Hb_009662_040--Hb_000666_040 Hb_009662_040--Hb_002999_020 Hb_153258_030 Hb_153258_030 Hb_009662_040--Hb_153258_030 Hb_009662_040--Hb_016734_110 Hb_009662_040--Hb_000742_040 Hb_016911_010 Hb_016911_010 Hb_009062_020--Hb_016911_010 Hb_001136_080 Hb_001136_080 Hb_009062_020--Hb_001136_080 Hb_009062_020--Hb_001775_140 Hb_009062_020--Hb_000934_120 Hb_015292_020 Hb_015292_020 Hb_009062_020--Hb_015292_020 Hb_051212_020 Hb_051212_020 Hb_009062_020--Hb_051212_020 Hb_034713_010 Hb_034713_010 Hb_140627_040--Hb_034713_010 Hb_003680_240 Hb_003680_240 Hb_140627_040--Hb_003680_240 Hb_009367_070 Hb_009367_070 Hb_140627_040--Hb_009367_070 Hb_140627_040--Hb_051212_020 Hb_000207_060 Hb_000207_060 Hb_140627_040--Hb_000207_060 Hb_140627_040--Hb_009062_020 Hb_000934_120--Hb_000796_110 Hb_000934_120--Hb_001775_140 Hb_000934_120--Hb_016911_010 Hb_000934_120--Hb_051212_020 Hb_003197_050 Hb_003197_050 Hb_000934_120--Hb_003197_050 Hb_000796_110--Hb_153258_030 Hb_000796_110--Hb_002999_020 Hb_001416_120 Hb_001416_120 Hb_000796_110--Hb_001416_120 Hb_000796_110--Hb_000742_040 Hb_090210_010 Hb_090210_010 Hb_000796_110--Hb_090210_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0486103 0.215345 1.74859 6.52293 0 0.177628
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0176642 0.624194

CAGE analysis