Hb_002811_100

Information

Type -
Description -
Location Contig2811: 84319-89093
Sequence    

Annotation

kegg
ID rcu:RCOM_1428510
description hypothetical protein
nr
ID XP_012089215.1
description PREDICTED: uncharacterized protein LOC105647658 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JUH0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23463 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002811_100 0.0 - - PREDICTED: uncharacterized protein LOC105647658 [Jatropha curcas]
2 Hb_004880_150 0.0704516919 - - PREDICTED: uncharacterized protein LOC105632834 [Jatropha curcas]
3 Hb_003776_060 0.0708409697 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
4 Hb_023001_040 0.0821285403 - - Metallopeptidase M24 family protein isoform 1 [Theobroma cacao]
5 Hb_010775_040 0.0851450328 - - PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Jatropha curcas]
6 Hb_000363_190 0.0859123707 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-2-like isoform X1 [Jatropha curcas]
7 Hb_002357_060 0.089470315 - - hypothetical protein CICLE_v10006112mg [Citrus clementina]
8 Hb_002660_170 0.0918117292 - - PREDICTED: dystrophia myotonica WD repeat-containing protein isoform X2 [Jatropha curcas]
9 Hb_000347_450 0.0934969257 - - PREDICTED: tRNA(His) guanylyltransferase 1-like isoform X2 [Jatropha curcas]
10 Hb_001221_020 0.0938832489 - - PREDICTED: probable aspartyl aminopeptidase [Jatropha curcas]
11 Hb_029243_030 0.0941231745 - - PREDICTED: regulatory-associated protein of TOR 1 isoform X1 [Jatropha curcas]
12 Hb_002477_290 0.094383999 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial-like [Jatropha curcas]
13 Hb_000663_060 0.0946606263 - - hypothetical protein JCGZ_16277 [Jatropha curcas]
14 Hb_002232_360 0.0949186348 - - PREDICTED: proline iminopeptidase isoform X2 [Jatropha curcas]
15 Hb_007218_120 0.0954953308 - - PREDICTED: pentatricopeptide repeat-containing protein At1g51965, mitochondrial [Jatropha curcas]
16 Hb_001671_100 0.0955029277 - - glycine-rich RNA-binding family protein [Populus trichocarpa]
17 Hb_000684_040 0.0959918754 - - PREDICTED: E3 ubiquitin-protein ligase MBR1 [Jatropha curcas]
18 Hb_016347_010 0.097113359 - - protein transporter, putative [Ricinus communis]
19 Hb_005648_010 0.098442184 - - PREDICTED: malate dehydrogenase, glyoxysomal isoform X1 [Jatropha curcas]
20 Hb_000841_050 0.0984839945 - - hypothetical protein L484_019972 [Morus notabilis]

Gene co-expression network

sample Hb_002811_100 Hb_002811_100 Hb_004880_150 Hb_004880_150 Hb_002811_100--Hb_004880_150 Hb_003776_060 Hb_003776_060 Hb_002811_100--Hb_003776_060 Hb_023001_040 Hb_023001_040 Hb_002811_100--Hb_023001_040 Hb_010775_040 Hb_010775_040 Hb_002811_100--Hb_010775_040 Hb_000363_190 Hb_000363_190 Hb_002811_100--Hb_000363_190 Hb_002357_060 Hb_002357_060 Hb_002811_100--Hb_002357_060 Hb_001221_020 Hb_001221_020 Hb_004880_150--Hb_001221_020 Hb_004880_150--Hb_003776_060 Hb_002477_290 Hb_002477_290 Hb_004880_150--Hb_002477_290 Hb_000025_190 Hb_000025_190 Hb_004880_150--Hb_000025_190 Hb_005648_010 Hb_005648_010 Hb_004880_150--Hb_005648_010 Hb_000327_250 Hb_000327_250 Hb_003776_060--Hb_000327_250 Hb_003544_030 Hb_003544_030 Hb_003776_060--Hb_003544_030 Hb_003776_060--Hb_023001_040 Hb_003776_060--Hb_001221_020 Hb_003058_120 Hb_003058_120 Hb_023001_040--Hb_003058_120 Hb_149985_010 Hb_149985_010 Hb_023001_040--Hb_149985_010 Hb_005588_060 Hb_005588_060 Hb_023001_040--Hb_005588_060 Hb_000663_060 Hb_000663_060 Hb_023001_040--Hb_000663_060 Hb_001828_180 Hb_001828_180 Hb_023001_040--Hb_001828_180 Hb_000167_010 Hb_000167_010 Hb_023001_040--Hb_000167_010 Hb_023771_010 Hb_023771_010 Hb_010775_040--Hb_023771_010 Hb_004781_010 Hb_004781_010 Hb_010775_040--Hb_004781_010 Hb_000917_230 Hb_000917_230 Hb_010775_040--Hb_000917_230 Hb_000347_450 Hb_000347_450 Hb_010775_040--Hb_000347_450 Hb_000684_040 Hb_000684_040 Hb_010775_040--Hb_000684_040 Hb_000363_190--Hb_001828_180 Hb_000363_190--Hb_000663_060 Hb_000409_050 Hb_000409_050 Hb_000363_190--Hb_000409_050 Hb_000398_060 Hb_000398_060 Hb_000363_190--Hb_000398_060 Hb_002232_360 Hb_002232_360 Hb_000363_190--Hb_002232_360 Hb_002301_100 Hb_002301_100 Hb_000363_190--Hb_002301_100 Hb_002357_060--Hb_005648_010 Hb_000367_090 Hb_000367_090 Hb_002357_060--Hb_000367_090 Hb_002357_060--Hb_023001_040 Hb_002357_060--Hb_004880_150 Hb_000179_270 Hb_000179_270 Hb_002357_060--Hb_000179_270 Hb_002357_060--Hb_000167_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.9377 5.29094 4.65721 8.86411 4.31736 3.61524
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.22326 8.7599 5.4087 9.80245 7.4639

CAGE analysis