Hb_002811_150

Information

Type -
Description -
Location Contig2811: 135399-136298
Sequence    

Annotation

kegg
ID rcu:RCOM_1428010
description hypothetical protein
nr
ID XP_012089226.1
description PREDICTED: uncharacterized protein LOC105647666 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JVT7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23472 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29410: 134830-136491
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002811_150 0.0 - - PREDICTED: uncharacterized protein LOC105647666 [Jatropha curcas]
2 Hb_006153_060 0.0930833488 - - catalytic, putative [Ricinus communis]
3 Hb_000599_210 0.1030360059 - - serine/threonine-protein kinase, putative [Ricinus communis]
4 Hb_000622_290 0.1116101344 - - PREDICTED: F-box/kelch-repeat protein At3g61590 [Jatropha curcas]
5 Hb_002762_110 0.1126180784 - - conserved hypothetical protein [Ricinus communis]
6 Hb_171718_010 0.1135250171 - - PREDICTED: disease resistance protein At4g27190-like [Eucalyptus grandis]
7 Hb_007192_030 0.121466734 - - PREDICTED: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [Jatropha curcas]
8 Hb_000365_010 0.1256129656 - - hypothetical protein POPTR_0006s10920g [Populus trichocarpa]
9 Hb_001214_050 0.1264509207 - - PREDICTED: bifunctional monothiol glutaredoxin-S16, chloroplastic [Jatropha curcas]
10 Hb_003994_160 0.1274310273 - - PREDICTED: uncharacterized protein LOC105131691 isoform X5 [Populus euphratica]
11 Hb_020025_010 0.1285253358 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
12 Hb_000107_430 0.1293331481 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Jatropha curcas]
13 Hb_000805_100 0.1301811843 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial isoform X1 [Jatropha curcas]
14 Hb_000358_020 0.1311113335 - - PREDICTED: uncharacterized protein C05D11.7-like [Jatropha curcas]
15 Hb_000909_080 0.1311656401 - - PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Jatropha curcas]
16 Hb_005016_040 0.1316895289 transcription factor TF Family: E2F-DP PREDICTED: transcription factor-like protein DPB isoform X2 [Jatropha curcas]
17 Hb_000035_480 0.1318643038 - - PREDICTED: probable protein phosphatase 2C 59 [Jatropha curcas]
18 Hb_140627_010 0.1330261869 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001946_380 0.1331401989 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 34-like [Jatropha curcas]
20 Hb_002303_020 0.1333605336 - - PREDICTED: lysine--tRNA ligase-like [Gossypium raimondii]

Gene co-expression network

sample Hb_002811_150 Hb_002811_150 Hb_006153_060 Hb_006153_060 Hb_002811_150--Hb_006153_060 Hb_000599_210 Hb_000599_210 Hb_002811_150--Hb_000599_210 Hb_000622_290 Hb_000622_290 Hb_002811_150--Hb_000622_290 Hb_002762_110 Hb_002762_110 Hb_002811_150--Hb_002762_110 Hb_171718_010 Hb_171718_010 Hb_002811_150--Hb_171718_010 Hb_007192_030 Hb_007192_030 Hb_002811_150--Hb_007192_030 Hb_002677_020 Hb_002677_020 Hb_006153_060--Hb_002677_020 Hb_002239_050 Hb_002239_050 Hb_006153_060--Hb_002239_050 Hb_000035_480 Hb_000035_480 Hb_006153_060--Hb_000035_480 Hb_140627_010 Hb_140627_010 Hb_006153_060--Hb_140627_010 Hb_000403_070 Hb_000403_070 Hb_006153_060--Hb_000403_070 Hb_002615_030 Hb_002615_030 Hb_000599_210--Hb_002615_030 Hb_005218_080 Hb_005218_080 Hb_000599_210--Hb_005218_080 Hb_000599_210--Hb_171718_010 Hb_000365_010 Hb_000365_010 Hb_000599_210--Hb_000365_010 Hb_000599_210--Hb_000622_290 Hb_000622_290--Hb_002762_110 Hb_000622_290--Hb_007192_030 Hb_004644_030 Hb_004644_030 Hb_000622_290--Hb_004644_030 Hb_001946_380 Hb_001946_380 Hb_000622_290--Hb_001946_380 Hb_000107_430 Hb_000107_430 Hb_000622_290--Hb_000107_430 Hb_001369_790 Hb_001369_790 Hb_000622_290--Hb_001369_790 Hb_002762_110--Hb_004644_030 Hb_002762_110--Hb_000107_430 Hb_003053_110 Hb_003053_110 Hb_002762_110--Hb_003053_110 Hb_000077_150 Hb_000077_150 Hb_002762_110--Hb_000077_150 Hb_001214_050 Hb_001214_050 Hb_002762_110--Hb_001214_050 Hb_000035_350 Hb_000035_350 Hb_171718_010--Hb_000035_350 Hb_000358_020 Hb_000358_020 Hb_171718_010--Hb_000358_020 Hb_171718_010--Hb_002762_110 Hb_171718_010--Hb_001946_380 Hb_003875_030 Hb_003875_030 Hb_171718_010--Hb_003875_030 Hb_171718_010--Hb_005218_080 Hb_007192_030--Hb_001369_790 Hb_000086_080 Hb_000086_080 Hb_007192_030--Hb_000086_080 Hb_000394_180 Hb_000394_180 Hb_007192_030--Hb_000394_180 Hb_007904_230 Hb_007904_230 Hb_007192_030--Hb_007904_230 Hb_004951_060 Hb_004951_060 Hb_007192_030--Hb_004951_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.93952 9.19916 10.2071 14.4149 3.72011 4.10967
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.82044 17.4349 9.64693 7.87528 21.3372

CAGE analysis