Hb_002811_200

Information

Type -
Description -
Location Contig2811: 161435-164371
Sequence    

Annotation

kegg
ID rcu:RCOM_1427840
description calmodulin binding protein, putative
nr
ID XP_012089235.1
description PREDICTED: protein IQ-DOMAIN 14-like [Jatropha curcas]
swissprot
ID Q8L4D8
description Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1
trembl
ID A0A067JI65
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23479 PE=4 SV=1
Gene Ontology
ID GO:0005515
description protein iq-domain 14-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002811_200 0.0 - - PREDICTED: protein IQ-DOMAIN 14-like [Jatropha curcas]
2 Hb_001143_100 0.1075909035 - - PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Populus euphratica]
3 Hb_001425_010 0.1105311346 - - sugar transporter, putative [Ricinus communis]
4 Hb_000230_530 0.1115342731 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002811_190 0.1150085352 - - tRNA pseudouridine synthase d, putative [Ricinus communis]
6 Hb_000890_080 0.1169210386 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 34-like [Populus euphratica]
7 Hb_000997_290 0.1198597566 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
8 Hb_001564_070 0.1209642313 - - PREDICTED: G patch domain-containing protein TGH [Jatropha curcas]
9 Hb_000510_190 0.1212802928 - - glutathione reductase [Hevea brasiliensis]
10 Hb_005588_100 0.1219354846 - - protein phosphatase, putative [Ricinus communis]
11 Hb_000496_130 0.1231833611 - - PREDICTED: fructokinase-1 [Jatropha curcas]
12 Hb_003226_090 0.12346401 - - PREDICTED: bifunctional epoxide hydrolase 2 [Jatropha curcas]
13 Hb_009296_020 0.1294094567 desease resistance Gene Name: ATP-synt_ab_N PREDICTED: ATP synthase subunit beta, mitochondrial-like [Jatropha curcas]
14 Hb_001405_080 0.1306888865 - - PREDICTED: acylamino-acid-releasing enzyme [Jatropha curcas]
15 Hb_101334_020 0.1312370349 - - PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Jatropha curcas]
16 Hb_004111_030 0.1315759383 - - PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like [Jatropha curcas]
17 Hb_000070_110 0.1316021891 - - PREDICTED: uncharacterized protein LOC105645744 isoform X1 [Jatropha curcas]
18 Hb_010632_020 0.1318580481 - - hypothetical protein POPTR_0006s185902g, partial [Populus trichocarpa]
19 Hb_009193_010 0.1319117525 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
20 Hb_000804_020 0.1327385108 - - PREDICTED: aconitate hydratase, cytoplasmic [Jatropha curcas]

Gene co-expression network

sample Hb_002811_200 Hb_002811_200 Hb_001143_100 Hb_001143_100 Hb_002811_200--Hb_001143_100 Hb_001425_010 Hb_001425_010 Hb_002811_200--Hb_001425_010 Hb_000230_530 Hb_000230_530 Hb_002811_200--Hb_000230_530 Hb_002811_190 Hb_002811_190 Hb_002811_200--Hb_002811_190 Hb_000890_080 Hb_000890_080 Hb_002811_200--Hb_000890_080 Hb_000997_290 Hb_000997_290 Hb_002811_200--Hb_000997_290 Hb_000496_130 Hb_000496_130 Hb_001143_100--Hb_000496_130 Hb_000579_040 Hb_000579_040 Hb_001143_100--Hb_000579_040 Hb_000510_190 Hb_000510_190 Hb_001143_100--Hb_000510_190 Hb_032631_070 Hb_032631_070 Hb_001143_100--Hb_032631_070 Hb_003355_010 Hb_003355_010 Hb_001143_100--Hb_003355_010 Hb_008375_010 Hb_008375_010 Hb_001143_100--Hb_008375_010 Hb_018043_020 Hb_018043_020 Hb_001425_010--Hb_018043_020 Hb_008616_040 Hb_008616_040 Hb_001425_010--Hb_008616_040 Hb_159809_090 Hb_159809_090 Hb_001425_010--Hb_159809_090 Hb_001425_010--Hb_000510_190 Hb_003549_050 Hb_003549_050 Hb_001425_010--Hb_003549_050 Hb_003029_140 Hb_003029_140 Hb_001425_010--Hb_003029_140 Hb_101334_020 Hb_101334_020 Hb_000230_530--Hb_101334_020 Hb_009296_020 Hb_009296_020 Hb_000230_530--Hb_009296_020 Hb_002010_090 Hb_002010_090 Hb_000230_530--Hb_002010_090 Hb_000594_060 Hb_000594_060 Hb_000230_530--Hb_000594_060 Hb_000230_530--Hb_000510_190 Hb_000230_530--Hb_000496_130 Hb_002811_190--Hb_001425_010 Hb_000977_150 Hb_000977_150 Hb_002811_190--Hb_000977_150 Hb_001405_080 Hb_001405_080 Hb_002811_190--Hb_001405_080 Hb_021409_190 Hb_021409_190 Hb_002811_190--Hb_021409_190 Hb_000640_260 Hb_000640_260 Hb_002811_190--Hb_000640_260 Hb_000329_080 Hb_000329_080 Hb_002811_190--Hb_000329_080 Hb_003440_020 Hb_003440_020 Hb_000890_080--Hb_003440_020 Hb_004348_040 Hb_004348_040 Hb_000890_080--Hb_004348_040 Hb_002232_160 Hb_002232_160 Hb_000890_080--Hb_002232_160 Hb_000070_110 Hb_000070_110 Hb_000890_080--Hb_000070_110 Hb_002529_090 Hb_002529_090 Hb_000890_080--Hb_002529_090 Hb_007416_110 Hb_007416_110 Hb_000890_080--Hb_007416_110 Hb_001195_370 Hb_001195_370 Hb_000997_290--Hb_001195_370 Hb_009193_010 Hb_009193_010 Hb_000997_290--Hb_009193_010 Hb_000997_290--Hb_000329_080 Hb_000066_040 Hb_000066_040 Hb_000997_290--Hb_000066_040 Hb_000997_290--Hb_001425_010 Hb_011174_080 Hb_011174_080 Hb_000997_290--Hb_011174_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.456459 1.10875 2.82853 1.57353 0.310233 0.268636
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.586021 0.374563 0.699702 2.70828 4.01338

CAGE analysis