Hb_002811_330

Information

Type -
Description -
Location Contig2811: 273558-274655
Sequence    

Annotation

kegg
ID mdm:103427739
description calmodulin-like
nr
ID XP_012089252.1
description PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
swissprot
ID Q9LIK5
description Calmodulin-like protein 11 OS=Arabidopsis thaliana GN=CML11 PE=2 SV=1
trembl
ID A0A067JIE9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23490 PE=4 SV=1
Gene Ontology
ID GO:0005509
description calmodulin-like protein 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002811_330 0.0 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
2 Hb_002960_010 0.1015042854 - - Zeamatin precursor, putative [Ricinus communis]
3 Hb_136546_010 0.1399717174 - - PREDICTED: wall-associated receptor kinase-like 1, partial [Populus euphratica]
4 Hb_004079_110 0.1520083463 - - PREDICTED: uncharacterized protein LOC100257802 [Vitis vinifera]
5 Hb_007676_040 0.153286946 - - cellulose synthase, putative [Ricinus communis]
6 Hb_000521_360 0.154064124 - - PREDICTED: beta-glucosidase 17-like [Jatropha curcas]
7 Hb_002435_080 0.1638916224 - - conserved hypothetical protein [Ricinus communis]
8 Hb_005542_040 0.1643702108 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
9 Hb_107809_010 0.1678861742 - - JHL06P13.14 [Jatropha curcas]
10 Hb_002542_090 0.1703765806 - - Potassium transporter, putative [Ricinus communis]
11 Hb_005168_030 0.1715014883 - - unknown [Zea mays]
12 Hb_040963_010 0.1738138244 - - PREDICTED: polyneuridine-aldehyde esterase-like [Populus euphratica]
13 Hb_005614_030 0.174238115 - - PREDICTED: transcription factor SCREAM2-like isoform X1 [Jatropha curcas]
14 Hb_005010_040 0.1799223925 - - PREDICTED: uncharacterized protein LOC105630824 [Jatropha curcas]
15 Hb_024570_020 0.1824772787 transcription factor TF Family: MYB-related PREDICTED: transcription factor RAX2-like [Populus euphratica]
16 Hb_006949_030 0.1853078943 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
17 Hb_001427_220 0.18849387 - - hypothetical protein CISIN_1g033375mg [Citrus sinensis]
18 Hb_001345_010 0.1885199694 - - hypothetical protein MIMGU_mgv1a010889mg [Erythranthe guttata]
19 Hb_000501_110 0.1914223153 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Populus euphratica]
20 Hb_001006_200 0.1924127521 transcription factor TF Family: G2-like conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002811_330 Hb_002811_330 Hb_002960_010 Hb_002960_010 Hb_002811_330--Hb_002960_010 Hb_136546_010 Hb_136546_010 Hb_002811_330--Hb_136546_010 Hb_004079_110 Hb_004079_110 Hb_002811_330--Hb_004079_110 Hb_007676_040 Hb_007676_040 Hb_002811_330--Hb_007676_040 Hb_000521_360 Hb_000521_360 Hb_002811_330--Hb_000521_360 Hb_002435_080 Hb_002435_080 Hb_002811_330--Hb_002435_080 Hb_002960_010--Hb_000521_360 Hb_002960_010--Hb_007676_040 Hb_005168_030 Hb_005168_030 Hb_002960_010--Hb_005168_030 Hb_005542_040 Hb_005542_040 Hb_002960_010--Hb_005542_040 Hb_001345_010 Hb_001345_010 Hb_002960_010--Hb_001345_010 Hb_001427_220 Hb_001427_220 Hb_136546_010--Hb_001427_220 Hb_001388_020 Hb_001388_020 Hb_136546_010--Hb_001388_020 Hb_040963_010 Hb_040963_010 Hb_136546_010--Hb_040963_010 Hb_148121_030 Hb_148121_030 Hb_136546_010--Hb_148121_030 Hb_079158_010 Hb_079158_010 Hb_136546_010--Hb_079158_010 Hb_009778_050 Hb_009778_050 Hb_004079_110--Hb_009778_050 Hb_006949_030 Hb_006949_030 Hb_004079_110--Hb_006949_030 Hb_001660_040 Hb_001660_040 Hb_004079_110--Hb_001660_040 Hb_001723_070 Hb_001723_070 Hb_004079_110--Hb_001723_070 Hb_001621_020 Hb_001621_020 Hb_004079_110--Hb_001621_020 Hb_001609_080 Hb_001609_080 Hb_004079_110--Hb_001609_080 Hb_007676_040--Hb_005542_040 Hb_007676_040--Hb_001345_010 Hb_000501_110 Hb_000501_110 Hb_007676_040--Hb_000501_110 Hb_000108_090 Hb_000108_090 Hb_007676_040--Hb_000108_090 Hb_001634_080 Hb_001634_080 Hb_007676_040--Hb_001634_080 Hb_007676_040--Hb_000521_360 Hb_000521_360--Hb_001345_010 Hb_107809_010 Hb_107809_010 Hb_000521_360--Hb_107809_010 Hb_000521_360--Hb_005542_040 Hb_001565_010 Hb_001565_010 Hb_000521_360--Hb_001565_010 Hb_005276_220 Hb_005276_220 Hb_000521_360--Hb_005276_220 Hb_001856_060 Hb_001856_060 Hb_002435_080--Hb_001856_060 Hb_114025_010 Hb_114025_010 Hb_002435_080--Hb_114025_010 Hb_020902_020 Hb_020902_020 Hb_002435_080--Hb_020902_020 Hb_008080_050 Hb_008080_050 Hb_002435_080--Hb_008080_050 Hb_001013_040 Hb_001013_040 Hb_002435_080--Hb_001013_040 Hb_099198_010 Hb_099198_010 Hb_002435_080--Hb_099198_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.572175 0.732261 0.0390005 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.44053 0.29169

CAGE analysis