Hb_002814_060

Information

Type -
Description -
Location Contig2814: 106919-143112
Sequence    

Annotation

kegg
ID rcu:RCOM_0701540
description lipid binding protein, putative
nr
ID XP_012071440.1
description PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
swissprot
ID F4JSE7
description Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana GN=EDR2 PE=2 SV=1
trembl
ID A0A067KUH8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03981 PE=4 SV=1
Gene Ontology
ID GO:0005886
description protein enhanced disease resistance 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29461: 140570-142979
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002814_060 0.0 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
2 Hb_007456_040 0.1045654061 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B [Jatropha curcas]
3 Hb_086287_010 0.1067209218 - - PREDICTED: aminoacylase-1 isoform X1 [Jatropha curcas]
4 Hb_006508_030 0.1100597292 - - PREDICTED: CDPK-related kinase 1-like [Jatropha curcas]
5 Hb_074197_020 0.1118411908 - - PREDICTED: uncharacterized protein LOC105645948 [Jatropha curcas]
6 Hb_001194_020 0.1180675036 - - microtubule associated protein xmap215, putative [Ricinus communis]
7 Hb_002784_030 0.1208070455 - - hypothetical protein POPTR_0001s06740g [Populus trichocarpa]
8 Hb_001989_050 0.1213506765 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 5 [Jatropha curcas]
9 Hb_000261_100 0.1239701439 - - PREDICTED: beta-galactosidase 9 isoform X2 [Jatropha curcas]
10 Hb_000384_080 0.1255260658 - - PREDICTED: RING-H2 finger protein ATL7-like isoform X2 [Jatropha curcas]
11 Hb_012528_020 0.1268644615 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Jatropha curcas]
12 Hb_001504_040 0.1286423666 - - PREDICTED: factor of DNA methylation 1-like [Jatropha curcas]
13 Hb_000176_130 0.1289976413 - - PREDICTED: probable splicing factor 3A subunit 1 [Jatropha curcas]
14 Hb_000424_150 0.1290915279 - - PREDICTED: copper transporter 5.1-like [Jatropha curcas]
15 Hb_000630_030 0.129537338 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2 isoform X1 [Populus euphratica]
16 Hb_073973_150 0.1296746169 - - PREDICTED: aminoacylase-1 isoform X1 [Jatropha curcas]
17 Hb_001401_060 0.13036978 - - PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like [Jatropha curcas]
18 Hb_008484_010 0.1304471618 - - hypothetical protein B456_008G050700 [Gossypium raimondii]
19 Hb_041828_010 0.1306172041 - - PREDICTED: alpha-mannosidase [Jatropha curcas]
20 Hb_000640_070 0.1324163142 - - PREDICTED: vacuolar protein sorting-associated protein 51 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_002814_060 Hb_002814_060 Hb_007456_040 Hb_007456_040 Hb_002814_060--Hb_007456_040 Hb_086287_010 Hb_086287_010 Hb_002814_060--Hb_086287_010 Hb_006508_030 Hb_006508_030 Hb_002814_060--Hb_006508_030 Hb_074197_020 Hb_074197_020 Hb_002814_060--Hb_074197_020 Hb_001194_020 Hb_001194_020 Hb_002814_060--Hb_001194_020 Hb_002784_030 Hb_002784_030 Hb_002814_060--Hb_002784_030 Hb_000284_120 Hb_000284_120 Hb_007456_040--Hb_000284_120 Hb_001504_040 Hb_001504_040 Hb_007456_040--Hb_001504_040 Hb_000365_030 Hb_000365_030 Hb_007456_040--Hb_000365_030 Hb_041828_010 Hb_041828_010 Hb_007456_040--Hb_041828_010 Hb_118840_030 Hb_118840_030 Hb_007456_040--Hb_118840_030 Hb_004109_370 Hb_004109_370 Hb_086287_010--Hb_004109_370 Hb_061878_010 Hb_061878_010 Hb_086287_010--Hb_061878_010 Hb_000261_030 Hb_000261_030 Hb_086287_010--Hb_000261_030 Hb_160459_040 Hb_160459_040 Hb_086287_010--Hb_160459_040 Hb_000035_410 Hb_000035_410 Hb_086287_010--Hb_000035_410 Hb_028872_070 Hb_028872_070 Hb_086287_010--Hb_028872_070 Hb_018202_050 Hb_018202_050 Hb_006508_030--Hb_018202_050 Hb_000384_080 Hb_000384_080 Hb_006508_030--Hb_000384_080 Hb_001369_350 Hb_001369_350 Hb_006508_030--Hb_001369_350 Hb_012528_020 Hb_012528_020 Hb_006508_030--Hb_012528_020 Hb_000261_100 Hb_000261_100 Hb_006508_030--Hb_000261_100 Hb_000424_150 Hb_000424_150 Hb_074197_020--Hb_000424_150 Hb_004223_290 Hb_004223_290 Hb_074197_020--Hb_004223_290 Hb_003376_260 Hb_003376_260 Hb_074197_020--Hb_003376_260 Hb_000091_060 Hb_000091_060 Hb_074197_020--Hb_000091_060 Hb_000630_030 Hb_000630_030 Hb_074197_020--Hb_000630_030 Hb_008397_010 Hb_008397_010 Hb_001194_020--Hb_008397_010 Hb_000284_230 Hb_000284_230 Hb_001194_020--Hb_000284_230 Hb_000640_070 Hb_000640_070 Hb_001194_020--Hb_000640_070 Hb_073973_150 Hb_073973_150 Hb_001194_020--Hb_073973_150 Hb_006355_020 Hb_006355_020 Hb_001194_020--Hb_006355_020 Hb_001059_130 Hb_001059_130 Hb_001194_020--Hb_001059_130 Hb_002784_030--Hb_000640_070 Hb_001552_030 Hb_001552_030 Hb_002784_030--Hb_001552_030 Hb_012215_010 Hb_012215_010 Hb_002784_030--Hb_012215_010 Hb_002784_030--Hb_008397_010 Hb_002475_040 Hb_002475_040 Hb_002784_030--Hb_002475_040 Hb_002784_030--Hb_073973_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.17632 9.06786 8.50852 10.6419 9.5526 15.2002
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.18644 0.822307 2.46421 10.7643 11.7466

CAGE analysis