Hb_002818_100

Information

Type -
Description -
Location Contig2818: 124261-128041
Sequence    

Annotation

kegg
ID rcu:RCOM_1343140
description hypothetical protein
nr
ID KDP28351.1
description hypothetical protein JCGZ_14122 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JWL0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14122 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002818_100 0.0 - - hypothetical protein JCGZ_14122 [Jatropha curcas]
2 Hb_004032_240 0.1526324429 - - electron transporter, putative [Ricinus communis]
3 Hb_019153_040 0.1836403387 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
4 Hb_143629_050 0.203265516 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000958_010 0.2035268753 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002701_130 0.2078866662 transcription factor TF Family: MYB Myb domain protein 121 [Theobroma cacao]
7 Hb_010931_110 0.2100283812 - - ubiquitin-protein ligase, putative [Ricinus communis]
8 Hb_000751_090 0.2188403227 - - -
9 Hb_001220_040 0.2202622285 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
10 Hb_186982_030 0.2214796015 - - conserved hypothetical protein [Ricinus communis]
11 Hb_006452_060 0.2222260648 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
12 Hb_015456_020 0.2255190719 - - -
13 Hb_005298_030 0.2276998571 - - hypothetical protein JCGZ_18389 [Jatropha curcas]
14 Hb_006557_010 0.2281625518 - - -
15 Hb_000329_610 0.2287504111 - - conserved hypothetical protein [Ricinus communis]
16 Hb_015974_010 0.230243419 - - endonuclease/exonuclease/phosphatase family protein [Medicago truncatula]
17 Hb_030982_040 0.2306056433 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
18 Hb_004204_190 0.2314695491 - - putative iron-sulfur cluster biosynthesis protein Isd11 [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
19 Hb_000109_150 0.2315209928 - - conserved hypothetical protein [Ricinus communis]
20 Hb_017134_040 0.2318143401 - - hypothetical protein AALP_AA3G042000 [Arabis alpina]

Gene co-expression network

sample Hb_002818_100 Hb_002818_100 Hb_004032_240 Hb_004032_240 Hb_002818_100--Hb_004032_240 Hb_019153_040 Hb_019153_040 Hb_002818_100--Hb_019153_040 Hb_143629_050 Hb_143629_050 Hb_002818_100--Hb_143629_050 Hb_000958_010 Hb_000958_010 Hb_002818_100--Hb_000958_010 Hb_002701_130 Hb_002701_130 Hb_002818_100--Hb_002701_130 Hb_010931_110 Hb_010931_110 Hb_002818_100--Hb_010931_110 Hb_004032_240--Hb_000958_010 Hb_004032_240--Hb_010931_110 Hb_003893_170 Hb_003893_170 Hb_004032_240--Hb_003893_170 Hb_008453_020 Hb_008453_020 Hb_004032_240--Hb_008453_020 Hb_004032_240--Hb_019153_040 Hb_186982_030 Hb_186982_030 Hb_004032_240--Hb_186982_030 Hb_164732_010 Hb_164732_010 Hb_019153_040--Hb_164732_010 Hb_002983_020 Hb_002983_020 Hb_019153_040--Hb_002983_020 Hb_009680_030 Hb_009680_030 Hb_019153_040--Hb_009680_030 Hb_019153_040--Hb_010931_110 Hb_008376_010 Hb_008376_010 Hb_019153_040--Hb_008376_010 Hb_143629_050--Hb_010931_110 Hb_030620_010 Hb_030620_010 Hb_143629_050--Hb_030620_010 Hb_006452_060 Hb_006452_060 Hb_143629_050--Hb_006452_060 Hb_143629_050--Hb_004032_240 Hb_143629_050--Hb_000958_010 Hb_030982_040 Hb_030982_040 Hb_143629_050--Hb_030982_040 Hb_000958_010--Hb_008453_020 Hb_001514_200 Hb_001514_200 Hb_000958_010--Hb_001514_200 Hb_000117_040 Hb_000117_040 Hb_000958_010--Hb_000117_040 Hb_011609_190 Hb_011609_190 Hb_000958_010--Hb_011609_190 Hb_002200_110 Hb_002200_110 Hb_000958_010--Hb_002200_110 Hb_001628_110 Hb_001628_110 Hb_002701_130--Hb_001628_110 Hb_003507_020 Hb_003507_020 Hb_002701_130--Hb_003507_020 Hb_000329_610 Hb_000329_610 Hb_002701_130--Hb_000329_610 Hb_050964_020 Hb_050964_020 Hb_002701_130--Hb_050964_020 Hb_000853_370 Hb_000853_370 Hb_002701_130--Hb_000853_370 Hb_043637_010 Hb_043637_010 Hb_002701_130--Hb_043637_010 Hb_130177_010 Hb_130177_010 Hb_010931_110--Hb_130177_010 Hb_001198_090 Hb_001198_090 Hb_010931_110--Hb_001198_090 Hb_000987_050 Hb_000987_050 Hb_010931_110--Hb_000987_050 Hb_053543_010 Hb_053543_010 Hb_010931_110--Hb_053543_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0889673 0 0 0 0.302724 0.0547314
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0931672 0.128285 0.0694515 0.0291724 0

CAGE analysis