Hb_002818_130

Information

Type -
Description -
Location Contig2818: 152901-154950
Sequence    

Annotation

kegg
ID rcu:RCOM_1342740
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_002515162.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID H1A988
description 11-oxo-beta-amyrin 30-oxidase OS=Glycyrrhiza uralensis GN=CYP72A154 PE=1 SV=1
trembl
ID B9RN23
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1342740 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 734a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29499: 153288-154269 , PASA_asmbl_29500: 154280-155050
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002818_130 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_001310_020 0.0438995459 - - PREDICTED: cyclin-D5-1-like isoform X2 [Jatropha curcas]
3 Hb_001269_480 0.0513977039 - - PREDICTED: photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Jatropha curcas]
4 Hb_011381_120 0.0521912251 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Jatropha curcas]
5 Hb_001191_060 0.0533917428 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Populus euphratica]
6 Hb_001348_160 0.0616781833 - - Photosystem II 22 kDa protein, chloroplast precursor, putative [Ricinus communis]
7 Hb_002809_030 0.0621418778 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000923_030 0.0622796814 - - F-box family protein [Populus trichocarpa]
9 Hb_086022_020 0.0643486359 - - RecName: Full=Ribulose bisphosphate carboxylase small chain, chloroplastic; Short=RuBisCO small subunit; Flags: Precursor [Hevea brasiliensis]
10 Hb_000251_160 0.0658599508 - - chlorophyll A/B binding protein, putative [Ricinus communis]
11 Hb_003090_050 0.0676245587 - - fructose-1,6-bisphosphatase, putative [Ricinus communis]
12 Hb_008748_050 0.0687866039 - - PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Populus euphratica]
13 Hb_010697_020 0.0688426458 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000111_460 0.070064986 - - PREDICTED: uncharacterized protein LOC105631266 [Jatropha curcas]
15 Hb_000320_370 0.0737956557 - - PREDICTED: ATP synthase gamma chain, chloroplastic [Jatropha curcas]
16 Hb_000352_230 0.0743893954 - - PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic isoform X2 [Jatropha curcas]
17 Hb_004712_230 0.0744845256 - - PREDICTED: retrotransposon-like protein 1 [Jatropha curcas]
18 Hb_005483_050 0.0778894352 - - conserved hypothetical protein [Ricinus communis]
19 Hb_010812_030 0.0798392313 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000221_130 0.0800004491 - - thylakoid lumenal 29 kDa protein, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_002818_130 Hb_002818_130 Hb_001310_020 Hb_001310_020 Hb_002818_130--Hb_001310_020 Hb_001269_480 Hb_001269_480 Hb_002818_130--Hb_001269_480 Hb_011381_120 Hb_011381_120 Hb_002818_130--Hb_011381_120 Hb_001191_060 Hb_001191_060 Hb_002818_130--Hb_001191_060 Hb_001348_160 Hb_001348_160 Hb_002818_130--Hb_001348_160 Hb_002809_030 Hb_002809_030 Hb_002818_130--Hb_002809_030 Hb_001310_020--Hb_001191_060 Hb_001310_020--Hb_001269_480 Hb_001310_020--Hb_011381_120 Hb_001310_020--Hb_001348_160 Hb_000221_130 Hb_000221_130 Hb_001310_020--Hb_000221_130 Hb_001269_480--Hb_001191_060 Hb_001269_480--Hb_000221_130 Hb_001269_480--Hb_001348_160 Hb_086022_020 Hb_086022_020 Hb_001269_480--Hb_086022_020 Hb_009093_020 Hb_009093_020 Hb_011381_120--Hb_009093_020 Hb_000841_040 Hb_000841_040 Hb_011381_120--Hb_000841_040 Hb_000111_460 Hb_000111_460 Hb_011381_120--Hb_000111_460 Hb_003090_050 Hb_003090_050 Hb_011381_120--Hb_003090_050 Hb_001191_060--Hb_001348_160 Hb_000012_370 Hb_000012_370 Hb_001191_060--Hb_000012_370 Hb_003033_020 Hb_003033_020 Hb_001191_060--Hb_003033_020 Hb_010697_020 Hb_010697_020 Hb_001348_160--Hb_010697_020 Hb_001348_160--Hb_002809_030 Hb_031862_220 Hb_031862_220 Hb_001348_160--Hb_031862_220 Hb_000373_210 Hb_000373_210 Hb_001348_160--Hb_000373_210 Hb_000352_230 Hb_000352_230 Hb_002809_030--Hb_000352_230 Hb_000320_370 Hb_000320_370 Hb_002809_030--Hb_000320_370 Hb_000307_100 Hb_000307_100 Hb_002809_030--Hb_000307_100 Hb_000098_040 Hb_000098_040 Hb_002809_030--Hb_000098_040 Hb_002809_030--Hb_001191_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.621062 10.4242 5.41609 0.0163514 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.031351 0 0.0251109 35.8447

CAGE analysis