Hb_002820_090

Information

Type -
Description -
Location Contig2820: 64490-71724
Sequence    

Annotation

kegg
ID pop:POPTR_0005s15810g
description POPTRDRAFT_209853; hypothetical protein
nr
ID XP_012078213.1
description PREDICTED: WAT1-related protein At1g21890-like [Jatropha curcas]
swissprot
ID Q501F8
description WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1
trembl
ID A0A067KKK0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12077 PE=4 SV=1
Gene Ontology
ID GO:0016021
description wat1-related protein at4g08300-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002820_090 0.0 - - PREDICTED: WAT1-related protein At1g21890-like [Jatropha curcas]
2 Hb_002267_030 0.1078100172 - - hypothetical protein JCGZ_24883 [Jatropha curcas]
3 Hb_005714_140 0.1169815236 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
4 Hb_000260_130 0.1399803264 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
5 Hb_009787_020 0.147534758 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
6 Hb_002422_030 0.1487210004 - - E3 ubiquitin-protein ligase UPL5 -like protein [Gossypium arboreum]
7 Hb_000087_180 0.1512383143 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002236_020 0.154482513 - - PREDICTED: nephrocystin-3 [Jatropha curcas]
9 Hb_009786_010 0.1549743313 - - Phosphoprotein phosphatase [Theobroma cacao]
10 Hb_081686_030 0.1602142514 - - hypothetical protein MIMGU_mgv11b016770mg [Erythranthe guttata]
11 Hb_123078_010 0.1613883137 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
12 Hb_105814_020 0.1630815013 - - berberine bridge enzyme [Hevea brasiliensis]
13 Hb_001814_100 0.1633449688 - - PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]
14 Hb_011101_010 0.1636978967 - - hypothetical protein JCGZ_25132 [Jatropha curcas]
15 Hb_017434_020 0.1669231949 transcription factor TF Family: C2H2 Zinc finger protein 4 [Populus trichocarpa]
16 Hb_008550_030 0.1706948918 - - PREDICTED: tonoplast dicarboxylate transporter [Jatropha curcas]
17 Hb_000252_190 0.1744326678 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
18 Hb_007305_040 0.1758559173 - - Nodulin-26, putative [Ricinus communis]
19 Hb_024857_010 0.1793025044 - - glutaredoxin 2.1 [Hevea brasiliensis]
20 Hb_004218_290 0.1793573881 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 6 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_002820_090 Hb_002820_090 Hb_002267_030 Hb_002267_030 Hb_002820_090--Hb_002267_030 Hb_005714_140 Hb_005714_140 Hb_002820_090--Hb_005714_140 Hb_000260_130 Hb_000260_130 Hb_002820_090--Hb_000260_130 Hb_009787_020 Hb_009787_020 Hb_002820_090--Hb_009787_020 Hb_002422_030 Hb_002422_030 Hb_002820_090--Hb_002422_030 Hb_000087_180 Hb_000087_180 Hb_002820_090--Hb_000087_180 Hb_002267_030--Hb_005714_140 Hb_002267_030--Hb_000260_130 Hb_123078_010 Hb_123078_010 Hb_002267_030--Hb_123078_010 Hb_008550_030 Hb_008550_030 Hb_002267_030--Hb_008550_030 Hb_105814_020 Hb_105814_020 Hb_002267_030--Hb_105814_020 Hb_005714_140--Hb_000260_130 Hb_000252_190 Hb_000252_190 Hb_005714_140--Hb_000252_190 Hb_004242_160 Hb_004242_160 Hb_005714_140--Hb_004242_160 Hb_000060_100 Hb_000060_100 Hb_005714_140--Hb_000060_100 Hb_161045_010 Hb_161045_010 Hb_000260_130--Hb_161045_010 Hb_000260_130--Hb_004242_160 Hb_007305_040 Hb_007305_040 Hb_000260_130--Hb_007305_040 Hb_001511_270 Hb_001511_270 Hb_000260_130--Hb_001511_270 Hb_003031_070 Hb_003031_070 Hb_009787_020--Hb_003031_070 Hb_004659_110 Hb_004659_110 Hb_009787_020--Hb_004659_110 Hb_007885_120 Hb_007885_120 Hb_009787_020--Hb_007885_120 Hb_047725_010 Hb_047725_010 Hb_009787_020--Hb_047725_010 Hb_000702_040 Hb_000702_040 Hb_009787_020--Hb_000702_040 Hb_007007_110 Hb_007007_110 Hb_009787_020--Hb_007007_110 Hb_002422_030--Hb_161045_010 Hb_001814_100 Hb_001814_100 Hb_002422_030--Hb_001814_100 Hb_000840_230 Hb_000840_230 Hb_002422_030--Hb_000840_230 Hb_004162_030 Hb_004162_030 Hb_002422_030--Hb_004162_030 Hb_083862_010 Hb_083862_010 Hb_002422_030--Hb_083862_010 Hb_017434_020 Hb_017434_020 Hb_000087_180--Hb_017434_020 Hb_005183_010 Hb_005183_010 Hb_000087_180--Hb_005183_010 Hb_004968_050 Hb_004968_050 Hb_000087_180--Hb_004968_050 Hb_000506_130 Hb_000506_130 Hb_000087_180--Hb_000506_130 Hb_000087_180--Hb_005714_140 Hb_000417_230 Hb_000417_230 Hb_000087_180--Hb_000417_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.22679 0.0817131 0.974414 0 0.0676774
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0995439 0.345706

CAGE analysis