Hb_002831_040

Information

Type -
Description -
Location Contig2831: 68973-86356
Sequence    

Annotation

kegg
ID pop:POPTR_0005s07130g
description POPTRDRAFT_558478; hypothetical protein
nr
ID XP_012092509.1
description PREDICTED: fatty acid amide hydrolase-like [Jatropha curcas]
swissprot
ID Q7XJJ7
description Fatty acid amide hydrolase OS=Arabidopsis thaliana GN=FAAH PE=1 SV=1
trembl
ID B9H4P0
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s07130g PE=4 SV=1
Gene Ontology
ID GO:0016884
description fatty acid amide hydrolase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29620: 69271-77128 , PASA_asmbl_29621: 75333-75528 , PASA_asmbl_29622: 77323-77492 , PASA_asmbl_29623: 81918-86306 , PASA_asmbl_29624: 82390-86247
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002831_040 0.0 - - PREDICTED: fatty acid amide hydrolase-like [Jatropha curcas]
2 Hb_152453_010 0.1379446974 - - PREDICTED: putative transferase CAF17 homolog, mitochondrial [Jatropha curcas]
3 Hb_001266_140 0.1550317205 - - PREDICTED: protein RER1B [Jatropha curcas]
4 Hb_000976_080 0.1566801297 - - hypothetical protein VITISV_034376 [Vitis vinifera]
5 Hb_000189_510 0.1573364142 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
6 Hb_005085_020 0.1594006818 - - hypothetical protein B456_001G193200 [Gossypium raimondii]
7 Hb_005846_020 0.1641441127 - - PREDICTED: tubulin-folding cofactor C [Jatropha curcas]
8 Hb_000140_490 0.1649863674 - - BnaC01g32630D [Brassica napus]
9 Hb_000297_110 0.1668750007 - - PREDICTED: uncharacterized protein LOC105634718 [Jatropha curcas]
10 Hb_001160_120 0.1694030385 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005695_060 0.1700214454 - - PREDICTED: probable tRNA modification GTPase MnmE [Jatropha curcas]
12 Hb_135377_010 0.1717616771 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like, partial [Jatropha curcas]
13 Hb_000012_020 0.1738310833 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 20 [Jatropha curcas]
14 Hb_002783_120 0.1767388121 - - PREDICTED: uncharacterized protein LOC105635329 [Jatropha curcas]
15 Hb_007044_040 0.1839296835 - - PREDICTED: uncharacterized protein LOC105646814 [Jatropha curcas]
16 Hb_000345_530 0.1840992633 - - PREDICTED: uncharacterized protein LOC105647554 isoform X1 [Jatropha curcas]
17 Hb_002157_190 0.1852743709 - - PREDICTED: mRNA turnover protein 4 homolog [Jatropha curcas]
18 Hb_000566_100 0.1859334334 - - hypothetical protein JCGZ_17993 [Jatropha curcas]
19 Hb_035318_010 0.1862702697 - - PREDICTED: uncharacterized protein LOC105645250 [Jatropha curcas]
20 Hb_018954_020 0.1872055461 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Jatropha curcas]

Gene co-expression network

sample Hb_002831_040 Hb_002831_040 Hb_152453_010 Hb_152453_010 Hb_002831_040--Hb_152453_010 Hb_001266_140 Hb_001266_140 Hb_002831_040--Hb_001266_140 Hb_000976_080 Hb_000976_080 Hb_002831_040--Hb_000976_080 Hb_000189_510 Hb_000189_510 Hb_002831_040--Hb_000189_510 Hb_005085_020 Hb_005085_020 Hb_002831_040--Hb_005085_020 Hb_005846_020 Hb_005846_020 Hb_002831_040--Hb_005846_020 Hb_152453_010--Hb_005846_020 Hb_152453_010--Hb_000976_080 Hb_001910_020 Hb_001910_020 Hb_152453_010--Hb_001910_020 Hb_000345_530 Hb_000345_530 Hb_152453_010--Hb_000345_530 Hb_000617_220 Hb_000617_220 Hb_152453_010--Hb_000617_220 Hb_000392_050 Hb_000392_050 Hb_152453_010--Hb_000392_050 Hb_030827_030 Hb_030827_030 Hb_001266_140--Hb_030827_030 Hb_008556_030 Hb_008556_030 Hb_001266_140--Hb_008556_030 Hb_000567_360 Hb_000567_360 Hb_001266_140--Hb_000567_360 Hb_000797_050 Hb_000797_050 Hb_001266_140--Hb_000797_050 Hb_002681_170 Hb_002681_170 Hb_001266_140--Hb_002681_170 Hb_022693_030 Hb_022693_030 Hb_001266_140--Hb_022693_030 Hb_000976_080--Hb_005846_020 Hb_001001_020 Hb_001001_020 Hb_000976_080--Hb_001001_020 Hb_000976_080--Hb_000345_530 Hb_005695_060 Hb_005695_060 Hb_000976_080--Hb_005695_060 Hb_002783_120 Hb_002783_120 Hb_000976_080--Hb_002783_120 Hb_002750_050 Hb_002750_050 Hb_000189_510--Hb_002750_050 Hb_003376_050 Hb_003376_050 Hb_000189_510--Hb_003376_050 Hb_000189_510--Hb_001266_140 Hb_002942_060 Hb_002942_060 Hb_000189_510--Hb_002942_060 Hb_002836_140 Hb_002836_140 Hb_000189_510--Hb_002836_140 Hb_000189_510--Hb_000797_050 Hb_000976_260 Hb_000976_260 Hb_005085_020--Hb_000976_260 Hb_001142_050 Hb_001142_050 Hb_005085_020--Hb_001142_050 Hb_011013_010 Hb_011013_010 Hb_005085_020--Hb_011013_010 Hb_000012_020 Hb_000012_020 Hb_005085_020--Hb_000012_020 Hb_001488_340 Hb_001488_340 Hb_005085_020--Hb_001488_340 Hb_005085_020--Hb_001910_020 Hb_005803_010 Hb_005803_010 Hb_005846_020--Hb_005803_010 Hb_005846_020--Hb_000617_220 Hb_005846_020--Hb_005695_060 Hb_003091_010 Hb_003091_010 Hb_005846_020--Hb_003091_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
39.9191 2.08454 30.4847 9.19475 24.631 36.3753
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.73764 7.39373 7.21092 6.01321 4.88612

CAGE analysis