Hb_002837_090

Information

Type -
Description -
Location Contig2837: 108942-111710
Sequence    

Annotation

kegg
ID rcu:RCOM_1320090
description hypothetical protein
nr
ID XP_012071405.1
description PREDICTED: probable receptor-like protein kinase At5g18500 [Jatropha curcas]
swissprot
ID Q3EBR4
description Putative receptor-like protein kinase At2g30940 OS=Arabidopsis thaliana GN=At2g30940 PE=2 SV=2
trembl
ID A0A067KV67
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05030 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at5g18500

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002837_090 0.0 - - PREDICTED: probable receptor-like protein kinase At5g18500 [Jatropha curcas]
2 Hb_000317_090 0.132453221 - - hypothetical protein RCOM_1176360 [Ricinus communis]
3 Hb_032018_010 0.2036337799 - - PREDICTED: uncharacterized protein LOC105778873 [Gossypium raimondii]
4 Hb_000014_130 0.223280194 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
5 Hb_001276_010 0.2330725384 desease resistance Gene Name: NB-ARC unnamed protein product [Vitis vinifera]
6 Hb_000062_500 0.2423991642 - - PREDICTED: urease-like [Zea mays]
7 Hb_007904_190 0.2442276011 - - -
8 Hb_000176_060 0.244595901 - - unnamed protein product [Vitis vinifera]
9 Hb_182310_010 0.2484995247 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
10 Hb_000563_280 0.2505546446 - - PREDICTED: uncharacterized protein At4g02000-like [Eucalyptus grandis]
11 Hb_011794_020 0.258289804 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
12 Hb_101040_010 0.2589110519 - - -
13 Hb_003772_020 0.2673323401 - - PREDICTED: uncharacterized protein LOC105037131, partial [Elaeis guineensis]
14 Hb_041237_010 0.2706992898 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003772_080 0.2723838232 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
16 Hb_022452_010 0.2808745735 - - -
17 Hb_004480_070 0.2831852329 - - cytochrome P450, putative [Ricinus communis]
18 Hb_105484_010 0.2843346232 - - carbohydrate-binding-like fold protein, partial [Manihot esculenta]
19 Hb_126838_020 0.2863651396 - - JHL22C18.7 [Jatropha curcas]
20 Hb_000831_040 0.2890656027 - - -

Gene co-expression network

sample Hb_002837_090 Hb_002837_090 Hb_000317_090 Hb_000317_090 Hb_002837_090--Hb_000317_090 Hb_032018_010 Hb_032018_010 Hb_002837_090--Hb_032018_010 Hb_000014_130 Hb_000014_130 Hb_002837_090--Hb_000014_130 Hb_001276_010 Hb_001276_010 Hb_002837_090--Hb_001276_010 Hb_000062_500 Hb_000062_500 Hb_002837_090--Hb_000062_500 Hb_007904_190 Hb_007904_190 Hb_002837_090--Hb_007904_190 Hb_000317_090--Hb_001276_010 Hb_003772_080 Hb_003772_080 Hb_000317_090--Hb_003772_080 Hb_171659_010 Hb_171659_010 Hb_000317_090--Hb_171659_010 Hb_022452_010 Hb_022452_010 Hb_000317_090--Hb_022452_010 Hb_003816_020 Hb_003816_020 Hb_000317_090--Hb_003816_020 Hb_032018_010--Hb_000062_500 Hb_005203_050 Hb_005203_050 Hb_032018_010--Hb_005203_050 Hb_032018_010--Hb_000014_130 Hb_003772_020 Hb_003772_020 Hb_032018_010--Hb_003772_020 Hb_032018_010--Hb_000317_090 Hb_041237_010 Hb_041237_010 Hb_000014_130--Hb_041237_010 Hb_007978_020 Hb_007978_020 Hb_000014_130--Hb_007978_020 Hb_000014_130--Hb_003772_020 Hb_002904_090 Hb_002904_090 Hb_000014_130--Hb_002904_090 Hb_003398_010 Hb_003398_010 Hb_000014_130--Hb_003398_010 Hb_001276_010--Hb_022452_010 Hb_000176_060 Hb_000176_060 Hb_001276_010--Hb_000176_060 Hb_001276_010--Hb_171659_010 Hb_001276_010--Hb_003772_080 Hb_003222_010 Hb_003222_010 Hb_001276_010--Hb_003222_010 Hb_000062_500--Hb_005203_050 Hb_000062_500--Hb_003772_020 Hb_000062_500--Hb_007978_020 Hb_000062_500--Hb_000014_130 Hb_167316_010 Hb_167316_010 Hb_000062_500--Hb_167316_010 Hb_007904_190--Hb_000014_130 Hb_004534_020 Hb_004534_020 Hb_007904_190--Hb_004534_020 Hb_165078_010 Hb_165078_010 Hb_007904_190--Hb_165078_010 Hb_003609_010 Hb_003609_010 Hb_007904_190--Hb_003609_010 Hb_024828_040 Hb_024828_040 Hb_007904_190--Hb_024828_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0263923 0.0109203 0 0 0.013221 0.0462743
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis