Hb_002837_150

Information

Type -
Description -
Location Contig2837: 164027-165391
Sequence    

Annotation

kegg
ID cit:102626324
description putative receptor-like protein kinase At3g47110-like
nr
ID KCW45854.1
description hypothetical protein EUGRSUZ_L00324 [Eucalyptus grandis]
swissprot
ID C0LGK9
description Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1
trembl
ID A0A058ZWN1
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L00324 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable lrr receptor-like serine threonine-protein kinase at3g47570-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29704: 164570-164914
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002837_150 0.0 - - hypothetical protein EUGRSUZ_L00324 [Eucalyptus grandis]
2 Hb_103632_010 0.0517196169 - - triacylglycerol lipase, putative [Ricinus communis]
3 Hb_001141_010 0.0747390158 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
4 Hb_001269_440 0.0794770139 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
5 Hb_003212_030 0.0964283103 - - multidrug resistance pump, putative [Ricinus communis]
6 Hb_004617_010 0.0988692905 - - PREDICTED: protein TRANSPARENT TESTA 12-like isoform X3 [Citrus sinensis]
7 Hb_002835_120 0.1014315112 - - PREDICTED: uncharacterized protein LOC105640304 [Jatropha curcas]
8 Hb_000638_110 0.1028085975 transcription factor TF Family: NAC hypothetical protein POPTR_0007s04250g [Populus trichocarpa]
9 Hb_145975_010 0.1060768155 - - cytochrome P450, putative [Ricinus communis]
10 Hb_000025_150 0.1101842891 transcription factor TF Family: HSF hypothetical protein POPTR_0001s28040g [Populus trichocarpa]
11 Hb_004757_040 0.1131784992 - - -
12 Hb_001255_030 0.1138124695 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840, partial [Sesamum indicum]
13 Hb_001584_250 0.1148273947 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
14 Hb_000007_020 0.1184642547 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
15 Hb_000349_280 0.1204803771 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004757_010 0.1210473696 - - PREDICTED: uncharacterized protein LOC105121200 [Populus euphratica]
17 Hb_006618_100 0.1225151996 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
18 Hb_001343_060 0.1231370299 - - Cytochrome P450 [Theobroma cacao]
19 Hb_000438_180 0.1236271842 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
20 Hb_159791_010 0.1246716866 - - PREDICTED: cytochrome P450 84A1 [Jatropha curcas]

Gene co-expression network

sample Hb_002837_150 Hb_002837_150 Hb_103632_010 Hb_103632_010 Hb_002837_150--Hb_103632_010 Hb_001141_010 Hb_001141_010 Hb_002837_150--Hb_001141_010 Hb_001269_440 Hb_001269_440 Hb_002837_150--Hb_001269_440 Hb_003212_030 Hb_003212_030 Hb_002837_150--Hb_003212_030 Hb_004617_010 Hb_004617_010 Hb_002837_150--Hb_004617_010 Hb_002835_120 Hb_002835_120 Hb_002837_150--Hb_002835_120 Hb_103632_010--Hb_001141_010 Hb_000638_110 Hb_000638_110 Hb_103632_010--Hb_000638_110 Hb_001255_030 Hb_001255_030 Hb_103632_010--Hb_001255_030 Hb_004757_040 Hb_004757_040 Hb_103632_010--Hb_004757_040 Hb_000007_020 Hb_000007_020 Hb_103632_010--Hb_000007_020 Hb_001141_010--Hb_000638_110 Hb_001141_010--Hb_002835_120 Hb_001141_010--Hb_004757_040 Hb_001141_010--Hb_001269_440 Hb_000086_160 Hb_000086_160 Hb_001269_440--Hb_000086_160 Hb_002025_190 Hb_002025_190 Hb_001269_440--Hb_002025_190 Hb_005183_020 Hb_005183_020 Hb_001269_440--Hb_005183_020 Hb_000025_150 Hb_000025_150 Hb_001269_440--Hb_000025_150 Hb_001269_440--Hb_003212_030 Hb_005373_030 Hb_005373_030 Hb_003212_030--Hb_005373_030 Hb_003212_030--Hb_000086_160 Hb_003212_030--Hb_004617_010 Hb_001013_070 Hb_001013_070 Hb_003212_030--Hb_001013_070 Hb_011344_050 Hb_011344_050 Hb_004617_010--Hb_011344_050 Hb_159791_010 Hb_159791_010 Hb_004617_010--Hb_159791_010 Hb_004757_010 Hb_004757_010 Hb_004617_010--Hb_004757_010 Hb_001141_430 Hb_001141_430 Hb_004617_010--Hb_001141_430 Hb_145975_010 Hb_145975_010 Hb_004617_010--Hb_145975_010 Hb_005736_110 Hb_005736_110 Hb_002835_120--Hb_005736_110 Hb_002835_120--Hb_000638_110 Hb_002835_120--Hb_145975_010 Hb_000349_280 Hb_000349_280 Hb_002835_120--Hb_000349_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.67487 0.0708207 3.92064 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.120504 0.228389

CAGE analysis