Hb_002843_100

Information

Type -
Description -
Location Contig2843: 80517-81989
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002843_100 0.0 - - -
2 Hb_001633_100 0.1235834671 - - PREDICTED: protein NETWORKED 3A-like [Jatropha curcas]
3 Hb_002002_020 0.1325055354 - - Phosphoprotein phosphatase isoform 3 [Theobroma cacao]
4 Hb_001754_170 0.1329503506 - - PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog [Jatropha curcas]
5 Hb_002400_390 0.1402500148 - - PREDICTED: 60S ribosomal protein L4 [Vitis vinifera]
6 Hb_002405_020 0.143806461 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
7 Hb_003581_110 0.1480701209 - - PREDICTED: uncharacterized protein LOC105649778 isoform X2 [Jatropha curcas]
8 Hb_010068_030 0.1515522247 - - aconitase, putative [Ricinus communis]
9 Hb_183510_010 0.1517404452 - - PREDICTED: RPM1-interacting protein 4-like isoform X2 [Jatropha curcas]
10 Hb_024399_010 0.1521088394 - - PREDICTED: uncharacterized protein LOC105649031 [Jatropha curcas]
11 Hb_179511_010 0.1523886649 - - -
12 Hb_000684_300 0.1537137896 transcription factor TF Family: NF-YB hypothetical protein CICLE_v10012920mg [Citrus clementina]
13 Hb_000322_170 0.1554177599 - - PREDICTED: nucleosome assembly protein 1;3 [Jatropha curcas]
14 Hb_000614_080 0.1575546265 - - -
15 Hb_005333_020 0.1582274432 - - PREDICTED: protein CutA, chloroplastic [Jatropha curcas]
16 Hb_000392_280 0.1592605797 - - PREDICTED: pectinesterase 3 [Jatropha curcas]
17 Hb_000009_590 0.1593349531 - - PREDICTED: prolyl endopeptidase-like isoform X1 [Jatropha curcas]
18 Hb_002149_040 0.1613997439 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000482_110 0.1624094195 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
20 Hb_001016_060 0.1633316913 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002843_100 Hb_002843_100 Hb_001633_100 Hb_001633_100 Hb_002843_100--Hb_001633_100 Hb_002002_020 Hb_002002_020 Hb_002843_100--Hb_002002_020 Hb_001754_170 Hb_001754_170 Hb_002843_100--Hb_001754_170 Hb_002400_390 Hb_002400_390 Hb_002843_100--Hb_002400_390 Hb_002405_020 Hb_002405_020 Hb_002843_100--Hb_002405_020 Hb_003581_110 Hb_003581_110 Hb_002843_100--Hb_003581_110 Hb_000016_280 Hb_000016_280 Hb_001633_100--Hb_000016_280 Hb_183510_010 Hb_183510_010 Hb_001633_100--Hb_183510_010 Hb_000322_170 Hb_000322_170 Hb_001633_100--Hb_000322_170 Hb_000093_130 Hb_000093_130 Hb_001633_100--Hb_000093_130 Hb_000116_570 Hb_000116_570 Hb_001633_100--Hb_000116_570 Hb_002002_020--Hb_183510_010 Hb_002002_020--Hb_000322_170 Hb_015401_020 Hb_015401_020 Hb_002002_020--Hb_015401_020 Hb_001178_060 Hb_001178_060 Hb_002002_020--Hb_001178_060 Hb_000174_200 Hb_000174_200 Hb_002002_020--Hb_000174_200 Hb_007534_040 Hb_007534_040 Hb_001754_170--Hb_007534_040 Hb_004374_150 Hb_004374_150 Hb_001754_170--Hb_004374_150 Hb_000236_300 Hb_000236_300 Hb_001754_170--Hb_000236_300 Hb_175612_010 Hb_175612_010 Hb_001754_170--Hb_175612_010 Hb_000107_170 Hb_000107_170 Hb_001754_170--Hb_000107_170 Hb_000617_220 Hb_000617_220 Hb_001754_170--Hb_000617_220 Hb_000482_110 Hb_000482_110 Hb_002400_390--Hb_000482_110 Hb_004096_170 Hb_004096_170 Hb_002400_390--Hb_004096_170 Hb_000265_150 Hb_000265_150 Hb_002400_390--Hb_000265_150 Hb_008406_160 Hb_008406_160 Hb_002400_390--Hb_008406_160 Hb_004722_060 Hb_004722_060 Hb_002400_390--Hb_004722_060 Hb_005015_010 Hb_005015_010 Hb_002400_390--Hb_005015_010 Hb_002149_040 Hb_002149_040 Hb_002405_020--Hb_002149_040 Hb_000771_160 Hb_000771_160 Hb_002405_020--Hb_000771_160 Hb_001357_190 Hb_001357_190 Hb_002405_020--Hb_001357_190 Hb_001016_060 Hb_001016_060 Hb_002405_020--Hb_001016_060 Hb_006173_020 Hb_006173_020 Hb_002405_020--Hb_006173_020 Hb_005410_010 Hb_005410_010 Hb_002405_020--Hb_005410_010 Hb_003581_110--Hb_001016_060 Hb_000392_280 Hb_000392_280 Hb_003581_110--Hb_000392_280 Hb_009801_010 Hb_009801_010 Hb_003581_110--Hb_009801_010 Hb_179511_010 Hb_179511_010 Hb_003581_110--Hb_179511_010 Hb_045502_010 Hb_045502_010 Hb_003581_110--Hb_045502_010 Hb_003581_110--Hb_002405_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.98908 2.60849 0.44953 0.796925 6.22827 2.90939
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.64348 2.34725 0.980342 0.785782 0

CAGE analysis