Hb_002843_120

Information

Type -
Description -
Location Contig2843: 83244-92566
Sequence    

Annotation

kegg
ID pop:POPTR_0012s03030g
description POPTRDRAFT_422332; hypothetical protein
nr
ID XP_012086015.1
description PREDICTED: uncharacterized protein LOC105645113 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K326
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22852 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29754: 83443-92499 , PASA_asmbl_29755: 83299-86290
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002843_120 0.0 - - PREDICTED: uncharacterized protein LOC105645113 isoform X1 [Jatropha curcas]
2 Hb_000603_280 0.0520678839 - - PREDICTED: uncharacterized protein LOC105638082 [Jatropha curcas]
3 Hb_002267_140 0.0587323478 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
4 Hb_138596_010 0.0605859609 - - PREDICTED: BTB/POZ domain-containing protein At2g13690 [Jatropha curcas]
5 Hb_000077_140 0.063217069 - - structural constituent of cell wall, putative [Ricinus communis]
6 Hb_003504_030 0.0663264813 - - PREDICTED: serine/threonine-protein phosphatase PP1-like isoform X2 [Jatropha curcas]
7 Hb_013399_100 0.0664951039 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000479_220 0.0673678625 - - PREDICTED: uncharacterized protein LOC105644125 [Jatropha curcas]
9 Hb_000866_460 0.0676680784 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like [Jatropha curcas]
10 Hb_005000_190 0.0688888207 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 64 [Jatropha curcas]
11 Hb_002235_300 0.0697061081 - - PREDICTED: pentatricopeptide repeat-containing protein At5g15280 isoform X1 [Jatropha curcas]
12 Hb_000684_250 0.0712905019 - - PREDICTED: uncharacterized protein LOC105642172 [Jatropha curcas]
13 Hb_000803_070 0.0722706333 - - PREDICTED: protein TRAUCO [Jatropha curcas]
14 Hb_030827_020 0.0746516806 - - PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]
15 Hb_000061_030 0.0762572197 - - PREDICTED: pentatricopeptide repeat-containing protein At4g21065 [Jatropha curcas]
16 Hb_000343_250 0.0766056912 - - PREDICTED: protein CASC3 [Jatropha curcas]
17 Hb_008253_030 0.0797515776 - - PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
18 Hb_000037_190 0.07982857 - - PREDICTED: uncharacterized protein LOC105641500 [Jatropha curcas]
19 Hb_000172_430 0.0801490751 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002732_040 0.0806906478 - - PREDICTED: uncharacterized protein LOC105628163 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002843_120 Hb_002843_120 Hb_000603_280 Hb_000603_280 Hb_002843_120--Hb_000603_280 Hb_002267_140 Hb_002267_140 Hb_002843_120--Hb_002267_140 Hb_138596_010 Hb_138596_010 Hb_002843_120--Hb_138596_010 Hb_000077_140 Hb_000077_140 Hb_002843_120--Hb_000077_140 Hb_003504_030 Hb_003504_030 Hb_002843_120--Hb_003504_030 Hb_013399_100 Hb_013399_100 Hb_002843_120--Hb_013399_100 Hb_000603_280--Hb_000077_140 Hb_007163_120 Hb_007163_120 Hb_000603_280--Hb_007163_120 Hb_005653_090 Hb_005653_090 Hb_000603_280--Hb_005653_090 Hb_008406_200 Hb_008406_200 Hb_000603_280--Hb_008406_200 Hb_000603_280--Hb_013399_100 Hb_008253_030 Hb_008253_030 Hb_002267_140--Hb_008253_030 Hb_001767_140 Hb_001767_140 Hb_002267_140--Hb_001767_140 Hb_002267_140--Hb_138596_010 Hb_002276_240 Hb_002276_240 Hb_002267_140--Hb_002276_240 Hb_002253_080 Hb_002253_080 Hb_002267_140--Hb_002253_080 Hb_008695_110 Hb_008695_110 Hb_138596_010--Hb_008695_110 Hb_005993_050 Hb_005993_050 Hb_138596_010--Hb_005993_050 Hb_000479_220 Hb_000479_220 Hb_138596_010--Hb_000479_220 Hb_000343_250 Hb_000343_250 Hb_138596_010--Hb_000343_250 Hb_000331_680 Hb_000331_680 Hb_000077_140--Hb_000331_680 Hb_000077_140--Hb_003504_030 Hb_000069_310 Hb_000069_310 Hb_000077_140--Hb_000069_310 Hb_000915_180 Hb_000915_180 Hb_000077_140--Hb_000915_180 Hb_000327_270 Hb_000327_270 Hb_003504_030--Hb_000327_270 Hb_000037_190 Hb_000037_190 Hb_003504_030--Hb_000037_190 Hb_001799_180 Hb_001799_180 Hb_003504_030--Hb_001799_180 Hb_003504_030--Hb_013399_100 Hb_002732_040 Hb_002732_040 Hb_003504_030--Hb_002732_040 Hb_001409_020 Hb_001409_020 Hb_003504_030--Hb_001409_020 Hb_013399_100--Hb_001409_020 Hb_000060_090 Hb_000060_090 Hb_013399_100--Hb_000060_090 Hb_105105_020 Hb_105105_020 Hb_013399_100--Hb_105105_020 Hb_000780_230 Hb_000780_230 Hb_013399_100--Hb_000780_230 Hb_010618_010 Hb_010618_010 Hb_013399_100--Hb_010618_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.7884 26.2362 19.2513 15.9859 17.736 22.4149
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.8744 12.3748 25.028 12.9386 17.2779

CAGE analysis