Hb_002863_040

Information

Type -
Description -
Location Contig2863: 22348-23436
Sequence    

Annotation

kegg
ID rcu:RCOM_1443220
description hypothetical protein
nr
ID XP_012067439.1
description PREDICTED: uncharacterized protein LOC105630268 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L3V5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26936 PE=4 SV=1
Gene Ontology
ID GO:0070461
description PREDICTED: uncharacterized protein LOC105630268

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002863_040 0.0 - - PREDICTED: uncharacterized protein LOC105630268 [Jatropha curcas]
2 Hb_000195_020 0.0850588281 - - PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial [Jatropha curcas]
3 Hb_004096_030 0.0885742768 - - PREDICTED: KH domain-containing protein At4g18375-like isoform X1 [Jatropha curcas]
4 Hb_004048_090 0.0906252905 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Jatropha curcas]
5 Hb_003406_040 0.0971174307 - - PREDICTED: ATP-dependent RNA helicase DHX36 [Jatropha curcas]
6 Hb_004195_280 0.0983894208 - - PREDICTED: CDK5RAP1-like protein [Jatropha curcas]
7 Hb_004096_020 0.1021667956 - - PREDICTED: KH domain-containing protein At4g18375-like, partial [Fragaria vesca subsp. vesca]
8 Hb_000684_420 0.1032184939 transcription factor TF Family: C3H zinc finger protein, putative [Ricinus communis]
9 Hb_004934_090 0.1037238824 - - hypothetical protein JCGZ_08073 [Jatropha curcas]
10 Hb_000803_150 0.104694226 - - PREDICTED: uncharacterized protein LOC105648311 isoform X2 [Jatropha curcas]
11 Hb_004447_060 0.1055656022 - - PREDICTED: uncharacterized protein LOC105636329 isoform X2 [Jatropha curcas]
12 Hb_000034_050 0.1060322435 - - PREDICTED: uncharacterized protein LOC105637912 [Jatropha curcas]
13 Hb_005237_060 0.1066347358 transcription factor TF Family: ERF ERF/AP2 domain-containing transcription factor [Manihot esculenta]
14 Hb_000162_090 0.1072351973 - - PREDICTED: methyltransferase-like protein 16 isoform X1 [Jatropha curcas]
15 Hb_009265_080 0.1081546942 - - PREDICTED: apoptosis inhibitor 5 [Jatropha curcas]
16 Hb_001871_040 0.1088777941 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 1-like isoform X2 [Jatropha curcas]
17 Hb_002174_060 0.1093883886 - - PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like [Jatropha curcas]
18 Hb_001866_110 0.11026855 - - PREDICTED: trihelix transcription factor GT-3b-like [Jatropha curcas]
19 Hb_000134_090 0.110318993 - - PREDICTED: chaperone protein dnaJ 1, mitochondrial [Jatropha curcas]
20 Hb_031862_180 0.111554498 - - PREDICTED: uncharacterized protein LOC105644669 [Jatropha curcas]

Gene co-expression network

sample Hb_002863_040 Hb_002863_040 Hb_000195_020 Hb_000195_020 Hb_002863_040--Hb_000195_020 Hb_004096_030 Hb_004096_030 Hb_002863_040--Hb_004096_030 Hb_004048_090 Hb_004048_090 Hb_002863_040--Hb_004048_090 Hb_003406_040 Hb_003406_040 Hb_002863_040--Hb_003406_040 Hb_004195_280 Hb_004195_280 Hb_002863_040--Hb_004195_280 Hb_004096_020 Hb_004096_020 Hb_002863_040--Hb_004096_020 Hb_001797_050 Hb_001797_050 Hb_000195_020--Hb_001797_050 Hb_000195_020--Hb_004096_020 Hb_005532_050 Hb_005532_050 Hb_000195_020--Hb_005532_050 Hb_003938_080 Hb_003938_080 Hb_000195_020--Hb_003938_080 Hb_033834_010 Hb_033834_010 Hb_000195_020--Hb_033834_010 Hb_009411_010 Hb_009411_010 Hb_000195_020--Hb_009411_010 Hb_004934_090 Hb_004934_090 Hb_004096_030--Hb_004934_090 Hb_003406_010 Hb_003406_010 Hb_004096_030--Hb_003406_010 Hb_005245_130 Hb_005245_130 Hb_004096_030--Hb_005245_130 Hb_001019_230 Hb_001019_230 Hb_004096_030--Hb_001019_230 Hb_000134_090 Hb_000134_090 Hb_004096_030--Hb_000134_090 Hb_002030_030 Hb_002030_030 Hb_004096_030--Hb_002030_030 Hb_041091_010 Hb_041091_010 Hb_004048_090--Hb_041091_010 Hb_000803_150 Hb_000803_150 Hb_004048_090--Hb_000803_150 Hb_004048_090--Hb_000195_020 Hb_004048_090--Hb_003938_080 Hb_000538_200 Hb_000538_200 Hb_004048_090--Hb_000538_200 Hb_123777_030 Hb_123777_030 Hb_003406_040--Hb_123777_030 Hb_003406_040--Hb_004096_020 Hb_001871_040 Hb_001871_040 Hb_003406_040--Hb_001871_040 Hb_000005_380 Hb_000005_380 Hb_003406_040--Hb_000005_380 Hb_002150_030 Hb_002150_030 Hb_003406_040--Hb_002150_030 Hb_007407_040 Hb_007407_040 Hb_003406_040--Hb_007407_040 Hb_002174_060 Hb_002174_060 Hb_004195_280--Hb_002174_060 Hb_010423_020 Hb_010423_020 Hb_004195_280--Hb_010423_020 Hb_009265_080 Hb_009265_080 Hb_004195_280--Hb_009265_080 Hb_171900_100 Hb_171900_100 Hb_004195_280--Hb_171900_100 Hb_003006_060 Hb_003006_060 Hb_004195_280--Hb_003006_060 Hb_000179_020 Hb_000179_020 Hb_004195_280--Hb_000179_020 Hb_046615_020 Hb_046615_020 Hb_004096_020--Hb_046615_020 Hb_004096_020--Hb_001871_040 Hb_004096_020--Hb_123777_030 Hb_000357_080 Hb_000357_080 Hb_004096_020--Hb_000357_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.87524 3.39984 2.28308 1.2956 6.0964 11.2037
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.74442 3.40882 4.44859 1.4834 3.17474

CAGE analysis