Hb_002869_060

Information

Type -
Description -
Location Contig2869: 54689-78832
Sequence    

Annotation

kegg
ID rcu:RCOM_0279080
description kinesin heavy chain, putative
nr
ID XP_012076051.1
description PREDICTED: kinesin-related protein 4 [Jatropha curcas]
swissprot
ID Q6S001
description Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1
trembl
ID A0A067KED0
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_12760 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin-related protein 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29904: 54484-56809
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002869_060 0.0 - - PREDICTED: kinesin-related protein 4 [Jatropha curcas]
2 Hb_005000_010 0.14184203 - - PREDICTED: K(+) efflux antiporter 4 isoform X1 [Jatropha curcas]
3 Hb_000083_080 0.1444581858 - - PREDICTED: uncharacterized protein LOC105644669 [Jatropha curcas]
4 Hb_007765_130 0.1531684162 - - PREDICTED: UPF0503 protein At3g09070, chloroplastic [Jatropha curcas]
5 Hb_004330_020 0.156722459 - - PREDICTED: uncharacterized protein LOC105650086 [Jatropha curcas]
6 Hb_005276_070 0.1618905451 - - PREDICTED: RAN GTPase-activating protein 1 [Jatropha curcas]
7 Hb_000320_310 0.1624423162 - - PREDICTED: ankyrin repeat domain-containing protein 13C [Jatropha curcas]
8 Hb_001360_030 0.1634695881 - - PREDICTED: ACT domain-containing protein ACR10 [Jatropha curcas]
9 Hb_000357_070 0.1635709812 - - -
10 Hb_002217_360 0.1637066986 - - PREDICTED: nuclear poly(A) polymerase 3 isoform X1 [Jatropha curcas]
11 Hb_034579_020 0.1657974076 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002662_110 0.1662921461 - - Kinesin heavy chain, putative [Ricinus communis]
13 Hb_003416_020 0.1665193189 - - pentatricopeptide repeat-containing family protein [Populus trichocarpa]
14 Hb_002636_060 0.1704128767 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004218_200 0.1706035078 - - Ran GTPase binding protein, putative [Ricinus communis]
16 Hb_000200_330 0.1727759391 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
17 Hb_004994_330 0.1735402112 - - DNA binding protein, putative [Ricinus communis]
18 Hb_022693_110 0.1774725278 - - phosphate transporter [Manihot esculenta]
19 Hb_000012_320 0.1779672976 - - PREDICTED: uncharacterized protein LOC105638164 [Jatropha curcas]
20 Hb_126933_020 0.179017637 - - PREDICTED: uncharacterized protein LOC105638525 [Jatropha curcas]

Gene co-expression network

sample Hb_002869_060 Hb_002869_060 Hb_005000_010 Hb_005000_010 Hb_002869_060--Hb_005000_010 Hb_000083_080 Hb_000083_080 Hb_002869_060--Hb_000083_080 Hb_007765_130 Hb_007765_130 Hb_002869_060--Hb_007765_130 Hb_004330_020 Hb_004330_020 Hb_002869_060--Hb_004330_020 Hb_005276_070 Hb_005276_070 Hb_002869_060--Hb_005276_070 Hb_000320_310 Hb_000320_310 Hb_002869_060--Hb_000320_310 Hb_005000_010--Hb_000320_310 Hb_005000_010--Hb_004330_020 Hb_000274_050 Hb_000274_050 Hb_005000_010--Hb_000274_050 Hb_004218_200 Hb_004218_200 Hb_005000_010--Hb_004218_200 Hb_010863_030 Hb_010863_030 Hb_005000_010--Hb_010863_030 Hb_002876_200 Hb_002876_200 Hb_005000_010--Hb_002876_200 Hb_000130_140 Hb_000130_140 Hb_000083_080--Hb_000130_140 Hb_003580_050 Hb_003580_050 Hb_000083_080--Hb_003580_050 Hb_000417_050 Hb_000417_050 Hb_000083_080--Hb_000417_050 Hb_000333_030 Hb_000333_030 Hb_000083_080--Hb_000333_030 Hb_002662_110 Hb_002662_110 Hb_000083_080--Hb_002662_110 Hb_001936_190 Hb_001936_190 Hb_000083_080--Hb_001936_190 Hb_000042_050 Hb_000042_050 Hb_007765_130--Hb_000042_050 Hb_003055_070 Hb_003055_070 Hb_007765_130--Hb_003055_070 Hb_001365_030 Hb_001365_030 Hb_007765_130--Hb_001365_030 Hb_000005_100 Hb_000005_100 Hb_007765_130--Hb_000005_100 Hb_000679_080 Hb_000679_080 Hb_007765_130--Hb_000679_080 Hb_000093_140 Hb_000093_140 Hb_007765_130--Hb_000093_140 Hb_050847_040 Hb_050847_040 Hb_004330_020--Hb_050847_040 Hb_002675_080 Hb_002675_080 Hb_004330_020--Hb_002675_080 Hb_004330_020--Hb_007765_130 Hb_000635_050 Hb_000635_050 Hb_004330_020--Hb_000635_050 Hb_004330_020--Hb_000042_050 Hb_005977_060 Hb_005977_060 Hb_005276_070--Hb_005977_060 Hb_005276_070--Hb_002662_110 Hb_000441_050 Hb_000441_050 Hb_005276_070--Hb_000441_050 Hb_001365_020 Hb_001365_020 Hb_005276_070--Hb_001365_020 Hb_003053_070 Hb_003053_070 Hb_005276_070--Hb_003053_070 Hb_010632_020 Hb_010632_020 Hb_005276_070--Hb_010632_020 Hb_000320_310--Hb_004218_200 Hb_000320_310--Hb_010863_030 Hb_002897_010 Hb_002897_010 Hb_000320_310--Hb_002897_010 Hb_001123_310 Hb_001123_310 Hb_000320_310--Hb_001123_310 Hb_001195_550 Hb_001195_550 Hb_000320_310--Hb_001195_550
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.961196 1.35136 6.84751 5.2564 0.030907 1.57
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0287562 0.0905162 0.259762 2.49052 6.27753

CAGE analysis