Hb_002874_130

Information

Type transcription factor
Description TF Family: bZIP
Location Contig2874: 91446-96487
Sequence    

Annotation

kegg
ID pop:POPTR_0006s29250g
description hypothetical protein
nr
ID XP_012076304.1
description PREDICTED: basic leucine zipper 9 [Jatropha curcas]
swissprot
ID Q9FUD3
description Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1
trembl
ID A0A067KBB0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06993 PE=4 SV=1
Gene Ontology
ID GO:0003700
description basic leucine zipper 9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29992: 91490-92739 , PASA_asmbl_29993: 93429-93698
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002874_130 0.0 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 9 [Jatropha curcas]
2 Hb_002259_060 0.1209561351 - - PREDICTED: kinesin-like calmodulin-binding protein isoform X4 [Jatropha curcas]
3 Hb_022250_150 0.1292631625 - - PREDICTED: uncharacterized protein LOC105648687 [Jatropha curcas]
4 Hb_001675_010 0.1413623824 - - hypothetical protein TRIUR3_09961 [Triticum urartu]
5 Hb_003894_100 0.1466507291 - - PREDICTED: AT-hook motif nuclear-localized protein 1-like [Jatropha curcas]
6 Hb_003506_020 0.1488964618 - - PREDICTED: uncharacterized protein LOC105125881 isoform X1 [Populus euphratica]
7 Hb_002122_080 0.1515326846 - - -
8 Hb_001799_190 0.1529054956 - - PREDICTED: uncharacterized protein LOC105643221 [Jatropha curcas]
9 Hb_089140_040 0.1592946856 - - PREDICTED: uncharacterized protein LOC105637966 [Jatropha curcas]
10 Hb_004785_040 0.15957265 - - PREDICTED: abscisic acid 8'-hydroxylase 3-like [Jatropha curcas]
11 Hb_003544_070 0.1635682622 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005970_010 0.1643225351 - - PREDICTED: probable isoprenylcysteine alpha-carbonyl methylesterase ICMEL1 isoform X2 [Jatropha curcas]
13 Hb_000580_050 0.1661024729 - - -
14 Hb_001699_150 0.1692943564 - - hypothetical protein POPTR_0009s13450g [Populus trichocarpa]
15 Hb_000302_200 0.1704483608 - - ornithine cyclodeaminase, putative [Ricinus communis]
16 Hb_005180_010 0.170865211 - - cyclophilin [Hevea brasiliensis]
17 Hb_001369_160 0.1708725952 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
18 Hb_000856_300 0.1712875496 - - PREDICTED: uncharacterized protein LOC105640498 [Jatropha curcas]
19 Hb_000371_060 0.1736661669 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
20 Hb_000684_360 0.1739994722 transcription factor TF Family: AP2 hypothetical protein JCGZ_16454 [Jatropha curcas]

Gene co-expression network

sample Hb_002874_130 Hb_002874_130 Hb_002259_060 Hb_002259_060 Hb_002874_130--Hb_002259_060 Hb_022250_150 Hb_022250_150 Hb_002874_130--Hb_022250_150 Hb_001675_010 Hb_001675_010 Hb_002874_130--Hb_001675_010 Hb_003894_100 Hb_003894_100 Hb_002874_130--Hb_003894_100 Hb_003506_020 Hb_003506_020 Hb_002874_130--Hb_003506_020 Hb_002122_080 Hb_002122_080 Hb_002874_130--Hb_002122_080 Hb_002259_060--Hb_022250_150 Hb_008053_060 Hb_008053_060 Hb_002259_060--Hb_008053_060 Hb_004785_040 Hb_004785_040 Hb_002259_060--Hb_004785_040 Hb_005970_010 Hb_005970_010 Hb_002259_060--Hb_005970_010 Hb_089140_040 Hb_089140_040 Hb_002259_060--Hb_089140_040 Hb_022250_150--Hb_089140_040 Hb_000580_050 Hb_000580_050 Hb_022250_150--Hb_000580_050 Hb_022250_150--Hb_005970_010 Hb_062416_010 Hb_062416_010 Hb_022250_150--Hb_062416_010 Hb_022250_150--Hb_003506_020 Hb_012180_010 Hb_012180_010 Hb_022250_150--Hb_012180_010 Hb_001699_150 Hb_001699_150 Hb_001675_010--Hb_001699_150 Hb_002524_020 Hb_002524_020 Hb_001675_010--Hb_002524_020 Hb_001799_190 Hb_001799_190 Hb_001675_010--Hb_001799_190 Hb_000371_060 Hb_000371_060 Hb_001675_010--Hb_000371_060 Hb_003544_070 Hb_003544_070 Hb_001675_010--Hb_003544_070 Hb_002781_010 Hb_002781_010 Hb_001675_010--Hb_002781_010 Hb_001369_160 Hb_001369_160 Hb_003894_100--Hb_001369_160 Hb_002447_150 Hb_002447_150 Hb_003894_100--Hb_002447_150 Hb_008667_060 Hb_008667_060 Hb_003894_100--Hb_008667_060 Hb_000589_220 Hb_000589_220 Hb_003894_100--Hb_000589_220 Hb_002928_180 Hb_002928_180 Hb_003894_100--Hb_002928_180 Hb_003894_100--Hb_002122_080 Hb_000000_120 Hb_000000_120 Hb_003506_020--Hb_000000_120 Hb_000216_020 Hb_000216_020 Hb_003506_020--Hb_000216_020 Hb_003506_020--Hb_005970_010 Hb_003506_020--Hb_002122_080 Hb_002151_100 Hb_002151_100 Hb_003506_020--Hb_002151_100 Hb_028077_020 Hb_028077_020 Hb_003506_020--Hb_028077_020 Hb_007576_200 Hb_007576_200 Hb_002122_080--Hb_007576_200 Hb_002122_080--Hb_000371_060 Hb_000302_200 Hb_000302_200 Hb_002122_080--Hb_000302_200 Hb_000059_130 Hb_000059_130 Hb_002122_080--Hb_000059_130 Hb_002122_080--Hb_000216_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.94666 17.0849 6.3963 14.5311 5.58494 3.11751
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.86882 4.20691 0 16.9414 5.35772

CAGE analysis