Hb_002890_190

Information

Type -
Description -
Location Contig2890: 292773-293354
Sequence    

Annotation

kegg
ID rcu:RCOM_0977820
description heat-shock protein, putative
nr
ID XP_012069131.1
description PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
swissprot
ID P19244
description 22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1
trembl
ID A0A067KXM4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24896 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30214: 293989-302664
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002890_190 0.0 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
2 Hb_005730_100 0.1114687766 - - PREDICTED: 18.2 kDa class I heat shock protein-like [Gossypium raimondii]
3 Hb_000891_080 0.1598476855 - - PREDICTED: TMV resistance protein N-like, partial [Populus euphratica]
4 Hb_116436_010 0.1795203191 - - PREDICTED: uncharacterized protein LOC105766967 [Gossypium raimondii]
5 Hb_029980_010 0.2068787566 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
6 Hb_007382_020 0.2182336606 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
7 Hb_000107_130 0.2196450686 - - multicopper oxidase, putative [Ricinus communis]
8 Hb_013394_090 0.220990747 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000345_120 0.2211101403 - - PREDICTED: mediator of RNA polymerase II transcription subunit 37a [Jatropha curcas]
10 Hb_001104_040 0.2212262132 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
11 Hb_007127_010 0.2246612131 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
12 Hb_168893_010 0.2300352112 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Nelumbo nucifera]
13 Hb_029508_010 0.2311378797 transcription factor TF Family: HSF DNA binding protein, putative [Ricinus communis]
14 Hb_005730_080 0.237517421 - - PREDICTED: 17.6 kDa class I heat shock protein-like [Solanum lycopersicum]
15 Hb_092043_020 0.2403144175 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
16 Hb_025194_030 0.2483202041 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
17 Hb_000796_060 0.2603439015 - - Glycogenin-2 [Aegilops tauschii]
18 Hb_004529_020 0.2604024288 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
19 Hb_000115_170 0.2625762209 - - hypothetical protein JCGZ_18339 [Jatropha curcas]
20 Hb_002900_060 0.2699714466 - - CI small heat shock protein 2 [Prunus salicina]

Gene co-expression network

sample Hb_002890_190 Hb_002890_190 Hb_005730_100 Hb_005730_100 Hb_002890_190--Hb_005730_100 Hb_000891_080 Hb_000891_080 Hb_002890_190--Hb_000891_080 Hb_116436_010 Hb_116436_010 Hb_002890_190--Hb_116436_010 Hb_029980_010 Hb_029980_010 Hb_002890_190--Hb_029980_010 Hb_007382_020 Hb_007382_020 Hb_002890_190--Hb_007382_020 Hb_000107_130 Hb_000107_130 Hb_002890_190--Hb_000107_130 Hb_005730_100--Hb_000891_080 Hb_005730_100--Hb_029980_010 Hb_000488_030 Hb_000488_030 Hb_005730_100--Hb_000488_030 Hb_001104_040 Hb_001104_040 Hb_005730_100--Hb_001104_040 Hb_000398_130 Hb_000398_130 Hb_005730_100--Hb_000398_130 Hb_000891_080--Hb_116436_010 Hb_000891_080--Hb_001104_040 Hb_000891_080--Hb_029980_010 Hb_092043_020 Hb_092043_020 Hb_000891_080--Hb_092043_020 Hb_007127_010 Hb_007127_010 Hb_116436_010--Hb_007127_010 Hb_116436_010--Hb_000107_130 Hb_116436_010--Hb_001104_040 Hb_116436_010--Hb_092043_020 Hb_002900_060 Hb_002900_060 Hb_116436_010--Hb_002900_060 Hb_000046_220 Hb_000046_220 Hb_029980_010--Hb_000046_220 Hb_168893_010 Hb_168893_010 Hb_029980_010--Hb_168893_010 Hb_029980_010--Hb_000488_030 Hb_025194_030 Hb_025194_030 Hb_007382_020--Hb_025194_030 Hb_004846_180 Hb_004846_180 Hb_007382_020--Hb_004846_180 Hb_008749_050 Hb_008749_050 Hb_007382_020--Hb_008749_050 Hb_184326_010 Hb_184326_010 Hb_007382_020--Hb_184326_010 Hb_168978_040 Hb_168978_040 Hb_007382_020--Hb_168978_040 Hb_003992_260 Hb_003992_260 Hb_007382_020--Hb_003992_260 Hb_000060_110 Hb_000060_110 Hb_000107_130--Hb_000060_110 Hb_000005_120 Hb_000005_120 Hb_000107_130--Hb_000005_120 Hb_000011_130 Hb_000011_130 Hb_000107_130--Hb_000011_130 Hb_000046_140 Hb_000046_140 Hb_000107_130--Hb_000046_140 Hb_000081_070 Hb_000081_070 Hb_000107_130--Hb_000081_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.3514 24.2395 1.7517 8.72834 271.942 18.241
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.235172 0 0.477014 0.26701 9.83904

CAGE analysis