Hb_002897_020

Information

Type -
Description -
Location Contig2897: 13312-14937
Sequence    

Annotation

kegg
ID rcu:RCOM_0690210
description inorganic phosphate transporter, putative
nr
ID AIY53216.1
description phosphate transporter [Manihot esculenta]
swissprot
ID Q94DB8
description Inorganic phosphate transporter 1-11 OS=Oryza sativa subsp. japonica GN=PHT1-11 PE=2 SV=1
trembl
ID A0A0A1G3V7
description Phosphate transporter OS=Manihot esculenta GN=PT1;7 PE=2 SV=1
Gene Ontology
ID GO:0016021
description probable inorganic phosphate transporter 1-3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002897_020 0.0 - - phosphate transporter [Manihot esculenta]
2 Hb_115513_030 0.1692340669 - - PREDICTED: uncharacterized protein At2g34160 [Jatropha curcas]
3 Hb_011942_030 0.1759565266 - - -
4 Hb_000836_180 0.177127891 - - ferric reductase oxidase [Manihot esculenta]
5 Hb_000433_050 0.1942356152 - - PREDICTED: cell number regulator 1 isoform X1 [Vitis vinifera]
6 Hb_104641_010 0.2036119045 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
7 Hb_179363_010 0.2086461214 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
8 Hb_000540_220 0.2138648474 - - hypothetical protein JCGZ_05605 [Jatropha curcas]
9 Hb_101437_010 0.2176489413 - - PREDICTED: protein P21-like [Jatropha curcas]
10 Hb_001515_040 0.2183642356 - - -
11 Hb_010994_020 0.2202921254 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
12 Hb_112703_010 0.2220922527 - - PREDICTED: cytochrome P450 CYP72A219-like [Prunus mume]
13 Hb_000025_490 0.2233251452 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
14 Hb_020367_010 0.2236509484 - - hypothetical protein PRUPE_ppa004271mg [Prunus persica]
15 Hb_086063_030 0.2249000255 - - PREDICTED: pre-mRNA-processing-splicing factor 8-like [Camelina sativa]
16 Hb_007966_010 0.2249098898 - - carbohydrate binding protein, putative [Ricinus communis]
17 Hb_011549_020 0.2249351546 - - -
18 Hb_156637_010 0.2249614505 - - PREDICTED: aldose reductase-like [Camelina sativa]
19 Hb_001740_020 0.2249826969 - - hypothetical protein JCGZ_23765 [Jatropha curcas]
20 Hb_008725_220 0.2250048861 - - PREDICTED: uncharacterized protein LOC105642593 [Jatropha curcas]

Gene co-expression network

sample Hb_002897_020 Hb_002897_020 Hb_115513_030 Hb_115513_030 Hb_002897_020--Hb_115513_030 Hb_011942_030 Hb_011942_030 Hb_002897_020--Hb_011942_030 Hb_000836_180 Hb_000836_180 Hb_002897_020--Hb_000836_180 Hb_000433_050 Hb_000433_050 Hb_002897_020--Hb_000433_050 Hb_104641_010 Hb_104641_010 Hb_002897_020--Hb_104641_010 Hb_179363_010 Hb_179363_010 Hb_002897_020--Hb_179363_010 Hb_114250_010 Hb_114250_010 Hb_115513_030--Hb_114250_010 Hb_114674_010 Hb_114674_010 Hb_115513_030--Hb_114674_010 Hb_000819_020 Hb_000819_020 Hb_115513_030--Hb_000819_020 Hb_008203_020 Hb_008203_020 Hb_115513_030--Hb_008203_020 Hb_115513_030--Hb_000836_180 Hb_039385_010 Hb_039385_010 Hb_011942_030--Hb_039385_010 Hb_011903_030 Hb_011903_030 Hb_011942_030--Hb_011903_030 Hb_000742_050 Hb_000742_050 Hb_011942_030--Hb_000742_050 Hb_000629_050 Hb_000629_050 Hb_011942_030--Hb_000629_050 Hb_005417_020 Hb_005417_020 Hb_011942_030--Hb_005417_020 Hb_112703_010 Hb_112703_010 Hb_000836_180--Hb_112703_010 Hb_000836_180--Hb_179363_010 Hb_008651_010 Hb_008651_010 Hb_000836_180--Hb_008651_010 Hb_002289_180 Hb_002289_180 Hb_000836_180--Hb_002289_180 Hb_000836_180--Hb_000819_020 Hb_032071_010 Hb_032071_010 Hb_000836_180--Hb_032071_010 Hb_000433_050--Hb_179363_010 Hb_000433_050--Hb_008651_010 Hb_001515_040 Hb_001515_040 Hb_000433_050--Hb_001515_040 Hb_000025_490 Hb_000025_490 Hb_000433_050--Hb_000025_490 Hb_101437_010 Hb_101437_010 Hb_000433_050--Hb_101437_010 Hb_000433_050--Hb_112703_010 Hb_001361_010 Hb_001361_010 Hb_104641_010--Hb_001361_010 Hb_074672_010 Hb_074672_010 Hb_104641_010--Hb_074672_010 Hb_171974_010 Hb_171974_010 Hb_104641_010--Hb_171974_010 Hb_104641_010--Hb_000433_050 Hb_120011_010 Hb_120011_010 Hb_104641_010--Hb_120011_010 Hb_104641_010--Hb_000025_490 Hb_179363_010--Hb_008651_010 Hb_179363_010--Hb_112703_010 Hb_179363_010--Hb_032071_010 Hb_179363_010--Hb_002289_180 Hb_179363_010--Hb_001515_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0155395 0.167737 0.161667 0.0090993 0 0.0109621
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis