Hb_002942_180

Information

Type -
Description -
Location Contig2942: 168232-170509
Sequence    

Annotation

kegg
ID rcu:RCOM_1504210
description mitochondrial phosphate carrier protein, putative
nr
ID AIY24424.1
description phosphate transporter [Manihot esculenta]
swissprot
ID Q9FMU6
description Mitochondrial phosphate carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=MPT3 PE=2 SV=1
trembl
ID A0A0A1E3I6
description Phosphate transporter OS=Manihot esculenta GN=PT3;2 PE=2 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30808: 170089-170500
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002942_180 0.0 - - phosphate transporter [Manihot esculenta]
2 Hb_008226_110 0.1792961153 - - uncharacterized protein LOC100501343 [Zea mays]
3 Hb_020532_010 0.1879925645 - - PREDICTED: uncharacterized protein LOC105775165 [Gossypium raimondii]
4 Hb_131652_010 0.2031137511 - - hypothetical protein CICLE_v10010066mg [Citrus clementina]
5 Hb_006971_080 0.2128019388 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
6 Hb_005392_100 0.2166277416 - - Uncharacterized protein TCM_038736 [Theobroma cacao]
7 Hb_002267_120 0.2294792175 - - hypothetical protein B456_009G136300 [Gossypium raimondii]
8 Hb_021068_030 0.2298630686 transcription factor TF Family: M-type hypothetical protein B456_010G032700 [Gossypium raimondii]
9 Hb_004770_060 0.2638370686 - - unnamed protein product, partial [Coffea canephora]
10 Hb_000740_120 0.2747967164 - - -
11 Hb_030885_020 0.2929311299 - - -
12 Hb_033044_010 0.2929771354 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5-like isoform X3 [Gossypium raimondii]
13 Hb_003455_010 0.3028050626 - - hypothetical protein POPTR_0009s14040g [Populus trichocarpa]
14 Hb_005597_010 0.3028460391 - - -
15 Hb_011206_020 0.3343815798 - - -
16 Hb_000098_300 0.3346823779 - - -
17 Hb_169630_010 0.3367533422 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
18 Hb_000640_110 0.3385976118 - - -
19 Hb_082960_020 0.3453947546 - - hypothetical protein B456_012G107300 [Gossypium raimondii]
20 Hb_052402_010 0.3479261085 - - -

Gene co-expression network

sample Hb_002942_180 Hb_002942_180 Hb_008226_110 Hb_008226_110 Hb_002942_180--Hb_008226_110 Hb_020532_010 Hb_020532_010 Hb_002942_180--Hb_020532_010 Hb_131652_010 Hb_131652_010 Hb_002942_180--Hb_131652_010 Hb_006971_080 Hb_006971_080 Hb_002942_180--Hb_006971_080 Hb_005392_100 Hb_005392_100 Hb_002942_180--Hb_005392_100 Hb_002267_120 Hb_002267_120 Hb_002942_180--Hb_002267_120 Hb_008226_110--Hb_006971_080 Hb_008226_110--Hb_005392_100 Hb_008226_110--Hb_002267_120 Hb_147355_030 Hb_147355_030 Hb_008226_110--Hb_147355_030 Hb_008226_110--Hb_131652_010 Hb_094132_010 Hb_094132_010 Hb_020532_010--Hb_094132_010 Hb_103093_010 Hb_103093_010 Hb_020532_010--Hb_103093_010 Hb_000193_030 Hb_000193_030 Hb_020532_010--Hb_000193_030 Hb_021068_030 Hb_021068_030 Hb_020532_010--Hb_021068_030 Hb_004770_060 Hb_004770_060 Hb_020532_010--Hb_004770_060 Hb_011206_020 Hb_011206_020 Hb_131652_010--Hb_011206_020 Hb_000098_300 Hb_000098_300 Hb_131652_010--Hb_000098_300 Hb_131652_010--Hb_005392_100 Hb_131652_010--Hb_006971_080 Hb_006971_080--Hb_002267_120 Hb_006971_080--Hb_005392_100 Hb_006971_080--Hb_147355_030 Hb_082960_020 Hb_082960_020 Hb_006971_080--Hb_082960_020 Hb_005392_100--Hb_002267_120 Hb_005392_100--Hb_147355_030 Hb_002267_120--Hb_147355_030 Hb_002267_120--Hb_082960_020 Hb_003455_010 Hb_003455_010 Hb_002267_120--Hb_003455_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0337811 0 0.0567709
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.043354 0

CAGE analysis