Hb_002943_010

Information

Type -
Description -
Location Contig2943: 28560-51597
Sequence    

Annotation

kegg
ID pop:POPTR_0075s00210g
description hypothetical protein
nr
ID XP_010273366.1
description PREDICTED: wall-associated receptor kinase-like 1 [Nelumbo nucifera]
swissprot
ID Q9SA25
description Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1
trembl
ID A0A0E0M4K1
description Uncharacterized protein OS=Oryza punctata PE=4 SV=1
Gene Ontology
ID GO:0004672
description wall-associated kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30822: 47918-48693 , PASA_asmbl_30824: 51398-52115
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002943_010 0.0 - - PREDICTED: wall-associated receptor kinase-like 1 [Nelumbo nucifera]
2 Hb_000340_220 0.1341266731 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000066_040 0.1483557082 - - PREDICTED: CDPK-related kinase 7-like [Populus euphratica]
4 Hb_002603_010 0.1514356459 - - unnamed protein product [Vitis vinifera]
5 Hb_013399_090 0.1547321719 - - PREDICTED: phospholipid:diacylglycerol acyltransferase 1-like [Jatropha curcas]
6 Hb_000404_040 0.1574621865 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002928_020 0.1599781636 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
8 Hb_010381_020 0.1613416997 - - Endosomal P24A protein precursor, putative [Ricinus communis]
9 Hb_000473_030 0.161439253 - - hypothetical protein JCGZ_19297 [Jatropha curcas]
10 Hb_000094_080 0.164219162 - - PREDICTED: uncharacterized protein LOC105633792 [Jatropha curcas]
11 Hb_102763_010 0.1665980937 - - PREDICTED: heat shock cognate protein 80 [Jatropha curcas]
12 Hb_009193_010 0.1710245974 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
13 Hb_001430_100 0.1717693039 - - cytochrome P450, putative [Ricinus communis]
14 Hb_001951_070 0.1726010226 - - putative protein [Arabidopsis thaliana]
15 Hb_000321_120 0.1727442287 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
16 Hb_005588_120 0.1728893946 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000804_020 0.1734020473 - - PREDICTED: aconitate hydratase, cytoplasmic [Jatropha curcas]
18 Hb_000007_410 0.1765909923 - - PREDICTED: proline-rich receptor-like protein kinase PERK9 isoform X2 [Populus euphratica]
19 Hb_004586_090 0.177530412 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform X1 [Jatropha curcas]
20 Hb_002603_040 0.1778426301 - - PREDICTED: phosphoinositide phospholipase C 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_002943_010 Hb_002943_010 Hb_000340_220 Hb_000340_220 Hb_002943_010--Hb_000340_220 Hb_000066_040 Hb_000066_040 Hb_002943_010--Hb_000066_040 Hb_002603_010 Hb_002603_010 Hb_002943_010--Hb_002603_010 Hb_013399_090 Hb_013399_090 Hb_002943_010--Hb_013399_090 Hb_000404_040 Hb_000404_040 Hb_002943_010--Hb_000404_040 Hb_002928_020 Hb_002928_020 Hb_002943_010--Hb_002928_020 Hb_000804_020 Hb_000804_020 Hb_000340_220--Hb_000804_020 Hb_003581_130 Hb_003581_130 Hb_000340_220--Hb_003581_130 Hb_005588_120 Hb_005588_120 Hb_000340_220--Hb_005588_120 Hb_004129_010 Hb_004129_010 Hb_000340_220--Hb_004129_010 Hb_001865_100 Hb_001865_100 Hb_000340_220--Hb_001865_100 Hb_000007_410 Hb_000007_410 Hb_000340_220--Hb_000007_410 Hb_009193_010 Hb_009193_010 Hb_000066_040--Hb_009193_010 Hb_002805_090 Hb_002805_090 Hb_000066_040--Hb_002805_090 Hb_001109_160 Hb_001109_160 Hb_000066_040--Hb_001109_160 Hb_000665_200 Hb_000665_200 Hb_000066_040--Hb_000665_200 Hb_000025_500 Hb_000025_500 Hb_000066_040--Hb_000025_500 Hb_004041_030 Hb_004041_030 Hb_000066_040--Hb_004041_030 Hb_017559_010 Hb_017559_010 Hb_002603_010--Hb_017559_010 Hb_000574_370 Hb_000574_370 Hb_002603_010--Hb_000574_370 Hb_000254_010 Hb_000254_010 Hb_002603_010--Hb_000254_010 Hb_000473_030 Hb_000473_030 Hb_002603_010--Hb_000473_030 Hb_033234_010 Hb_033234_010 Hb_002603_010--Hb_033234_010 Hb_014006_010 Hb_014006_010 Hb_013399_090--Hb_014006_010 Hb_000340_360 Hb_000340_360 Hb_013399_090--Hb_000340_360 Hb_013399_090--Hb_000025_500 Hb_000320_360 Hb_000320_360 Hb_013399_090--Hb_000320_360 Hb_001408_120 Hb_001408_120 Hb_013399_090--Hb_001408_120 Hb_004586_090 Hb_004586_090 Hb_013399_090--Hb_004586_090 Hb_052946_010 Hb_052946_010 Hb_000404_040--Hb_052946_010 Hb_000404_040--Hb_001408_120 Hb_000404_040--Hb_013399_090 Hb_001341_010 Hb_001341_010 Hb_000404_040--Hb_001341_010 Hb_000404_040--Hb_000025_500 Hb_000731_290 Hb_000731_290 Hb_000404_040--Hb_000731_290 Hb_000466_070 Hb_000466_070 Hb_002928_020--Hb_000466_070 Hb_009541_010 Hb_009541_010 Hb_002928_020--Hb_009541_010 Hb_001817_120 Hb_001817_120 Hb_002928_020--Hb_001817_120 Hb_012760_090 Hb_012760_090 Hb_002928_020--Hb_012760_090 Hb_002928_020--Hb_000254_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0474575 0.419344 0.374755 0.412615 0.128114 0.066271
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.00849648 0.0133734 0.244629 0.415435 0.603511

CAGE analysis