Hb_002982_060

Information

Type -
Description -
Location Contig2982: 44269-45241
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa025096mg
description hypothetical protein
nr
ID KDP27599.1
description hypothetical protein JCGZ_19604 [Jatropha curcas]
swissprot
ID Q8H5N9
description Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1
trembl
ID A0A067K706
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19604 PE=3 SV=1
Gene Ontology
ID GO:0016020
description aquaporin tip1-2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002982_060 0.0 - - hypothetical protein JCGZ_19604 [Jatropha curcas]
2 Hb_068578_010 0.0040492205 - - PREDICTED: uncharacterized protein LOC105789577 [Gossypium raimondii]
3 Hb_001629_070 0.0043085031 transcription factor TF Family: ULT Protein ULTRAPETALA2, putative [Ricinus communis]
4 Hb_009813_040 0.0063857273 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
5 Hb_099586_010 0.0076529683 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
6 Hb_000001_030 0.0101728895 - - polyprotein [Citrus endogenous pararetrovirus]
7 Hb_002656_040 0.0104000316 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
8 Hb_084299_010 0.010642975 - - PREDICTED: uncharacterized protein LOC104233139 [Nicotiana sylvestris]
9 Hb_008269_020 0.0112371409 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_000118_050 0.0113046236 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
11 Hb_065059_010 0.011562597 - - PREDICTED: uncharacterized protein LOC104907634 [Beta vulgaris subsp. vulgaris]
12 Hb_189099_010 0.0132762758 - - PREDICTED: uncharacterized protein At1g04910-like [Citrus sinensis]
13 Hb_072825_010 0.0183653976 - - Uncharacterized protein TCM_023328 [Theobroma cacao]
14 Hb_000482_100 0.0204695939 - - -
15 Hb_000283_160 0.0218284463 - - hypothetical protein JCGZ_23510 [Jatropha curcas]
16 Hb_031104_010 0.0250317043 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
17 Hb_048482_010 0.027578468 - - -
18 Hb_104984_010 0.0322777989 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
19 Hb_000206_260 0.0331656882 - - cysteine protease, putative [Ricinus communis]
20 Hb_041626_010 0.0359780057 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]

Gene co-expression network

sample Hb_002982_060 Hb_002982_060 Hb_068578_010 Hb_068578_010 Hb_002982_060--Hb_068578_010 Hb_001629_070 Hb_001629_070 Hb_002982_060--Hb_001629_070 Hb_009813_040 Hb_009813_040 Hb_002982_060--Hb_009813_040 Hb_099586_010 Hb_099586_010 Hb_002982_060--Hb_099586_010 Hb_000001_030 Hb_000001_030 Hb_002982_060--Hb_000001_030 Hb_002656_040 Hb_002656_040 Hb_002982_060--Hb_002656_040 Hb_068578_010--Hb_001629_070 Hb_189099_010 Hb_189099_010 Hb_068578_010--Hb_189099_010 Hb_068578_010--Hb_009813_040 Hb_068578_010--Hb_099586_010 Hb_068578_010--Hb_000001_030 Hb_001629_070--Hb_189099_010 Hb_001629_070--Hb_009813_040 Hb_001629_070--Hb_099586_010 Hb_001629_070--Hb_000001_030 Hb_009813_040--Hb_099586_010 Hb_009813_040--Hb_000001_030 Hb_009813_040--Hb_002656_040 Hb_084299_010 Hb_084299_010 Hb_009813_040--Hb_084299_010 Hb_008269_020 Hb_008269_020 Hb_009813_040--Hb_008269_020 Hb_000118_050 Hb_000118_050 Hb_009813_040--Hb_000118_050 Hb_099586_010--Hb_000001_030 Hb_099586_010--Hb_002656_040 Hb_099586_010--Hb_084299_010 Hb_099586_010--Hb_008269_020 Hb_099586_010--Hb_000118_050 Hb_000001_030--Hb_002656_040 Hb_000001_030--Hb_084299_010 Hb_000001_030--Hb_008269_020 Hb_000001_030--Hb_000118_050 Hb_065059_010 Hb_065059_010 Hb_000001_030--Hb_065059_010 Hb_002656_040--Hb_084299_010 Hb_002656_040--Hb_008269_020 Hb_002656_040--Hb_000118_050 Hb_002656_040--Hb_065059_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0265144 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0962031

CAGE analysis