Hb_002984_020

Information

Type -
Description -
Location Contig2984: 15272-15754
Sequence    

Annotation

kegg
ID egr:104424039
description proline-rich receptor-like protein kinase PERK15
nr
ID KCW53421.1
description hypothetical protein EUGRSUZ_J02661 [Eucalyptus grandis]
swissprot
ID P0DH62
description Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1
trembl
ID A0A059AIF8
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02661 PE=4 SV=1
Gene Ontology
ID GO:0005886
description proline-rich receptor-like protein kinase perk15

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002984_020 0.0 - - hypothetical protein EUGRSUZ_J02661 [Eucalyptus grandis]
2 Hb_007951_090 0.1993352473 - - hypothetical protein POPTR_0003s06080g [Populus trichocarpa]
3 Hb_003925_130 0.2066114496 - - glutathione s-transferase, putative [Ricinus communis]
4 Hb_072290_010 0.2088044141 - - PREDICTED: GRF1-interacting factor 1 [Gossypium raimondii]
5 Hb_010810_040 0.2203104106 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
6 Hb_000304_040 0.2210453611 - - PREDICTED: nicotianamine synthase-like [Jatropha curcas]
7 Hb_178711_010 0.2215177496 - - hypothetical protein PHAVU_003G094000g [Phaseolus vulgaris]
8 Hb_008092_030 0.2337305043 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
9 Hb_001147_080 0.2337622873 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_001414_120 0.235297363 - - Benzoate carboxyl methyltransferase, putative [Ricinus communis]
11 Hb_000365_040 0.2365499229 - - PREDICTED: uncharacterized protein LOC105649097 [Jatropha curcas]
12 Hb_000321_010 0.2373582215 - - Chitinase 1 precursor, putative [Ricinus communis]
13 Hb_125948_010 0.2378890515 - - heat-shock protein, putative [Ricinus communis]
14 Hb_163400_010 0.2446487483 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
15 Hb_002869_040 0.2459213204 - - PREDICTED: metal tolerance protein 4 [Jatropha curcas]
16 Hb_004705_090 0.2471026384 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001957_050 0.2541082317 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
18 Hb_055993_010 0.2557737136 - - PREDICTED: uncharacterized protein LOC104883809 [Beta vulgaris subsp. vulgaris]
19 Hb_004458_010 0.2583374284 - - PREDICTED: RING-H2 finger protein ATL78-like [Jatropha curcas]
20 Hb_091336_010 0.2594502519 - - -

Gene co-expression network

sample Hb_002984_020 Hb_002984_020 Hb_007951_090 Hb_007951_090 Hb_002984_020--Hb_007951_090 Hb_003925_130 Hb_003925_130 Hb_002984_020--Hb_003925_130 Hb_072290_010 Hb_072290_010 Hb_002984_020--Hb_072290_010 Hb_010810_040 Hb_010810_040 Hb_002984_020--Hb_010810_040 Hb_000304_040 Hb_000304_040 Hb_002984_020--Hb_000304_040 Hb_178711_010 Hb_178711_010 Hb_002984_020--Hb_178711_010 Hb_000321_010 Hb_000321_010 Hb_007951_090--Hb_000321_010 Hb_101370_010 Hb_101370_010 Hb_007951_090--Hb_101370_010 Hb_002783_210 Hb_002783_210 Hb_007951_090--Hb_002783_210 Hb_007951_090--Hb_010810_040 Hb_003529_010 Hb_003529_010 Hb_007951_090--Hb_003529_010 Hb_001489_040 Hb_001489_040 Hb_007951_090--Hb_001489_040 Hb_003925_130--Hb_000304_040 Hb_001414_120 Hb_001414_120 Hb_003925_130--Hb_001414_120 Hb_000769_050 Hb_000769_050 Hb_003925_130--Hb_000769_050 Hb_000925_020 Hb_000925_020 Hb_003925_130--Hb_000925_020 Hb_003925_130--Hb_178711_010 Hb_002548_010 Hb_002548_010 Hb_003925_130--Hb_002548_010 Hb_104169_010 Hb_104169_010 Hb_072290_010--Hb_104169_010 Hb_048183_010 Hb_048183_010 Hb_072290_010--Hb_048183_010 Hb_004705_090 Hb_004705_090 Hb_072290_010--Hb_004705_090 Hb_133648_010 Hb_133648_010 Hb_072290_010--Hb_133648_010 Hb_072290_010--Hb_178711_010 Hb_010810_040--Hb_000321_010 Hb_010810_040--Hb_001489_040 Hb_009620_010 Hb_009620_010 Hb_010810_040--Hb_009620_010 Hb_002420_030 Hb_002420_030 Hb_010810_040--Hb_002420_030 Hb_002869_040 Hb_002869_040 Hb_010810_040--Hb_002869_040 Hb_000304_040--Hb_001414_120 Hb_004458_010 Hb_004458_010 Hb_000304_040--Hb_004458_010 Hb_001957_050 Hb_001957_050 Hb_000304_040--Hb_001957_050 Hb_000304_040--Hb_000769_050 Hb_000373_110 Hb_000373_110 Hb_000304_040--Hb_000373_110 Hb_029622_070 Hb_029622_070 Hb_178711_010--Hb_029622_070 Hb_003531_010 Hb_003531_010 Hb_178711_010--Hb_003531_010 Hb_178711_010--Hb_000304_040 Hb_002081_180 Hb_002081_180 Hb_178711_010--Hb_002081_180 Hb_178711_010--Hb_048183_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.66606 1.27853 11.262 1.66883 1.70364
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis