Hb_002986_150

Information

Type -
Description -
Location Contig2986: 135945-146152
Sequence    

Annotation

kegg
ID -
description -
nr
ID KHN22304.1
description hypothetical protein glysoja_022060 [Glycine soja]
swissprot
ID -
description -
trembl
ID A0A0B2QQA2
description Uncharacterized protein OS=Glycine soja GN=glysoja_022060 PE=4 SV=1
Gene Ontology
ID GO:0016740
description p-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002986_150 0.0 - - hypothetical protein glysoja_022060 [Glycine soja]
2 Hb_001728_090 0.002387657 transcription factor TF Family: MYB MYB family protein [Jatropha curcas]
3 Hb_004994_270 0.0093604242 - - PREDICTED: tRNA-specific adenosine deaminase 1 isoform X2 [Jatropha curcas]
4 Hb_014549_030 0.0101916926 - - receptor-kinase, putative [Ricinus communis]
5 Hb_003549_110 0.0103270099 - - PREDICTED: uncharacterized protein LOC105647409 [Jatropha curcas]
6 Hb_004712_120 0.0105191398 - - Pectinesterase U1 precursor, putative [Ricinus communis]
7 Hb_000042_410 0.0107115868 - - Patatin precursor, putative [Ricinus communis]
8 Hb_171420_010 0.0116189452 - - hypothetical protein AMTR_s00126p00056890 [Amborella trichopoda]
9 Hb_001504_200 0.0128494325 - - Beta-3 adrenergic receptor, putative [Theobroma cacao]
10 Hb_002081_110 0.0141567481 - - PREDICTED: uncharacterized protein LOC105129793 isoform X1 [Populus euphratica]
11 Hb_001031_130 0.0142479614 - - zinc finger protein, putative [Ricinus communis]
12 Hb_187418_010 0.0175069224 - - PREDICTED: TMV resistance protein N-like, partial [Citrus sinensis]
13 Hb_000185_190 0.018228515 - - hypothetical protein L484_017526 [Morus notabilis]
14 Hb_015754_010 0.0197602062 - - Galactose oxidase precursor, putative [Ricinus communis]
15 Hb_020479_010 0.0199556622 - - cinnamyl alcohol dehydrogenase [Pyrus pyrifolia]
16 Hb_001948_060 0.0211962411 - - PREDICTED: glutathione S-transferase DHAR3, chloroplastic [Jatropha curcas]
17 Hb_001579_080 0.0217830016 - - serine/threonine protein kinase, putative [Ricinus communis]
18 Hb_003266_110 0.0240183249 - - ATP binding protein, putative [Ricinus communis]
19 Hb_137288_010 0.0249474132 - - hypothetical protein B456_003G055000 [Gossypium raimondii]
20 Hb_000771_010 0.0257150996 - - ubiquitin-protein ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_002986_150 Hb_002986_150 Hb_001728_090 Hb_001728_090 Hb_002986_150--Hb_001728_090 Hb_004994_270 Hb_004994_270 Hb_002986_150--Hb_004994_270 Hb_014549_030 Hb_014549_030 Hb_002986_150--Hb_014549_030 Hb_003549_110 Hb_003549_110 Hb_002986_150--Hb_003549_110 Hb_004712_120 Hb_004712_120 Hb_002986_150--Hb_004712_120 Hb_000042_410 Hb_000042_410 Hb_002986_150--Hb_000042_410 Hb_001728_090--Hb_003549_110 Hb_001728_090--Hb_004712_120 Hb_001504_200 Hb_001504_200 Hb_001728_090--Hb_001504_200 Hb_001728_090--Hb_004994_270 Hb_001728_090--Hb_014549_030 Hb_004994_270--Hb_014549_030 Hb_004994_270--Hb_000042_410 Hb_171420_010 Hb_171420_010 Hb_004994_270--Hb_171420_010 Hb_002081_110 Hb_002081_110 Hb_004994_270--Hb_002081_110 Hb_001031_130 Hb_001031_130 Hb_004994_270--Hb_001031_130 Hb_000185_190 Hb_000185_190 Hb_004994_270--Hb_000185_190 Hb_014549_030--Hb_000042_410 Hb_014549_030--Hb_171420_010 Hb_014549_030--Hb_002081_110 Hb_014549_030--Hb_001031_130 Hb_014549_030--Hb_000185_190 Hb_003549_110--Hb_004712_120 Hb_003549_110--Hb_001504_200 Hb_187418_010 Hb_187418_010 Hb_003549_110--Hb_187418_010 Hb_020479_010 Hb_020479_010 Hb_003549_110--Hb_020479_010 Hb_004712_120--Hb_001504_200 Hb_004712_120--Hb_187418_010 Hb_004712_120--Hb_020479_010 Hb_000042_410--Hb_171420_010 Hb_000042_410--Hb_002081_110 Hb_000042_410--Hb_001031_130 Hb_000042_410--Hb_000185_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0234079 0.0117294 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis