Hb_002999_030

Information

Type -
Description -
Location Contig2999: 51971-56313
Sequence    

Annotation

kegg
ID rcu:RCOM_0836600
description transferase, transferring glycosyl groups, putative (EC:2.4.1.134)
nr
ID XP_012067653.1
description PREDICTED: beta-1,3-galactosyltransferase 15 [Jatropha curcas]
swissprot
ID Q8L7F9
description Beta-1,3-galactosyltransferase 15 OS=Arabidopsis thaliana GN=B3GALT15 PE=2 SV=1
trembl
ID A0A067KYF3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15613 PE=4 SV=1
Gene Ontology
ID GO:0005794
description beta- -galactosyltransferase 15

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31337: 50086-53174
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002999_030 0.0 - - PREDICTED: beta-1,3-galactosyltransferase 15 [Jatropha curcas]
2 Hb_001488_290 0.1302145809 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]
3 Hb_001689_050 0.136354282 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
4 Hb_000086_180 0.1387375532 - - hypothetical protein JCGZ_17674 [Jatropha curcas]
5 Hb_004052_070 0.1406273198 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
6 Hb_003683_030 0.1445136548 - - PREDICTED: uridine-cytidine kinase C isoform X1 [Jatropha curcas]
7 Hb_000749_200 0.1511664857 - - PREDICTED: plant intracellular Ras-group-related LRR protein 6 isoform X1 [Jatropha curcas]
8 Hb_001141_050 0.1529923133 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X2 [Jatropha curcas]
9 Hb_001975_050 0.1530284238 - - Tyrosine-specific transport protein, putative [Ricinus communis]
10 Hb_001343_120 0.1543509106 - - conserved hypothetical protein [Ricinus communis]
11 Hb_150651_020 0.1555532937 - - Periplasmic beta-glucosidase precursor, putative [Ricinus communis]
12 Hb_004705_070 0.1557022676 - - PREDICTED: uncharacterized protein LOC105647312 isoform X1 [Jatropha curcas]
13 Hb_000035_210 0.155784615 - - PREDICTED: BTB/POZ domain-containing protein NPY1 [Jatropha curcas]
14 Hb_012653_010 0.1557945582 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
15 Hb_050847_040 0.1567742254 - - PREDICTED: uncharacterized protein LOC105649141 [Jatropha curcas]
16 Hb_003894_060 0.1576744699 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003992_050 0.1581363721 - - delta 9 desaturase, putative [Ricinus communis]
18 Hb_002400_010 0.1583730508 - - PREDICTED: putative L-ascorbate peroxidase 6 [Jatropha curcas]
19 Hb_000130_130 0.1598085085 - - hypothetical protein POPTR_0001s40330g [Populus trichocarpa]
20 Hb_001953_100 0.1599399352 - - PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_002999_030 Hb_002999_030 Hb_001488_290 Hb_001488_290 Hb_002999_030--Hb_001488_290 Hb_001689_050 Hb_001689_050 Hb_002999_030--Hb_001689_050 Hb_000086_180 Hb_000086_180 Hb_002999_030--Hb_000086_180 Hb_004052_070 Hb_004052_070 Hb_002999_030--Hb_004052_070 Hb_003683_030 Hb_003683_030 Hb_002999_030--Hb_003683_030 Hb_000749_200 Hb_000749_200 Hb_002999_030--Hb_000749_200 Hb_002876_200 Hb_002876_200 Hb_001488_290--Hb_002876_200 Hb_001488_290--Hb_000086_180 Hb_004586_040 Hb_004586_040 Hb_001488_290--Hb_004586_040 Hb_050847_040 Hb_050847_040 Hb_001488_290--Hb_050847_040 Hb_001141_050 Hb_001141_050 Hb_001488_290--Hb_001141_050 Hb_001250_040 Hb_001250_040 Hb_001689_050--Hb_001250_040 Hb_001689_050--Hb_003683_030 Hb_007594_080 Hb_007594_080 Hb_001689_050--Hb_007594_080 Hb_003894_060 Hb_003894_060 Hb_001689_050--Hb_003894_060 Hb_004837_210 Hb_004837_210 Hb_001689_050--Hb_004837_210 Hb_001953_100 Hb_001953_100 Hb_001689_050--Hb_001953_100 Hb_000008_390 Hb_000008_390 Hb_000086_180--Hb_000008_390 Hb_001160_110 Hb_001160_110 Hb_000086_180--Hb_001160_110 Hb_000032_410 Hb_000032_410 Hb_000086_180--Hb_000032_410 Hb_001663_130 Hb_001663_130 Hb_000086_180--Hb_001663_130 Hb_000649_330 Hb_000649_330 Hb_000086_180--Hb_000649_330 Hb_030131_020 Hb_030131_020 Hb_004052_070--Hb_030131_020 Hb_002498_170 Hb_002498_170 Hb_004052_070--Hb_002498_170 Hb_000035_210 Hb_000035_210 Hb_004052_070--Hb_000035_210 Hb_004907_090 Hb_004907_090 Hb_004052_070--Hb_004907_090 Hb_004013_030 Hb_004013_030 Hb_004052_070--Hb_004013_030 Hb_003160_070 Hb_003160_070 Hb_004052_070--Hb_003160_070 Hb_003683_030--Hb_000749_200 Hb_003683_030--Hb_003894_060 Hb_003683_030--Hb_004837_210 Hb_003683_030--Hb_001250_040 Hb_003683_030--Hb_001953_100 Hb_000056_310 Hb_000056_310 Hb_000749_200--Hb_000056_310 Hb_006252_030 Hb_006252_030 Hb_000749_200--Hb_006252_030 Hb_000465_440 Hb_000465_440 Hb_000749_200--Hb_000465_440 Hb_002400_010 Hb_002400_010 Hb_000749_200--Hb_002400_010 Hb_000934_260 Hb_000934_260 Hb_000749_200--Hb_000934_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.05884 2.31121 15.8287 5.21482 2.79207 1.269
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.343959 0.202994 0.542051 1.5528 6.41835

CAGE analysis