Hb_003018_200

Information

Type -
Description -
Location Contig3018: 94558-100345
Sequence    

Annotation

kegg
ID rcu:RCOM_0870970
description inositol or phosphatidylinositol kinase, putative (EC:2.7.11.1)
nr
ID XP_002521662.1
description inositol or phosphatidylinositol kinase, putative [Ricinus communis]
swissprot
ID Q10064
description Uncharacterized PI3/PI4-kinase family protein C1F5.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F5.11c PE=3 SV=1
trembl
ID B9S6P3
description Inositol or phosphatidylinositol kinase, putative OS=Ricinus communis GN=RCOM_0870970 PE=4 SV=1
Gene Ontology
ID GO:0016772
description phosphatidylinositol 3- and 4-kinase family protein with fat domain isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31773: 94261-96276
cDNA
(Sanger)
(ID:Location)		 002_O16.ab1: 94691-95413

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003018_200 0.0 - - inositol or phosphatidylinositol kinase, putative [Ricinus communis]
2 Hb_001863_390 0.0612344751 - - PREDICTED: monoacylglycerol lipase ABHD6 [Jatropha curcas]
3 Hb_002603_100 0.0668628678 - - ATATH9, putative [Ricinus communis]
4 Hb_008453_090 0.0690693918 - - hypothetical protein JCGZ_08177 [Jatropha curcas]
5 Hb_007101_150 0.0703349041 - - hypothetical protein CICLE_v10033984mg [Citrus clementina]
6 Hb_000056_340 0.0710879066 - - 60S ribosomal protein L34A [Hevea brasiliensis]
7 Hb_007101_130 0.0731144158 - - conserved hypothetical protein [Ricinus communis]
8 Hb_023386_080 0.0753422378 - - PREDICTED: peroxisome biogenesis protein 19-2-like [Jatropha curcas]
9 Hb_016065_010 0.0755871753 - - PREDICTED: pentatricopeptide repeat-containing protein At5g08305 [Jatropha curcas]
10 Hb_000376_050 0.0768470984 - - polyadenylate-binding protein, putative [Ricinus communis]
11 Hb_055062_030 0.0777071024 - - PREDICTED: mediator of RNA polymerase II transcription subunit 10b-like isoform X1 [Jatropha curcas]
12 Hb_004951_040 0.0780096962 - - PREDICTED: pentatricopeptide repeat-containing protein At1g31790-like [Jatropha curcas]
13 Hb_000221_220 0.0783713712 - - PREDICTED: 40S ribosomal protein S6 [Jatropha curcas]
14 Hb_001828_090 0.078549848 - - prohibitin, putative [Ricinus communis]
15 Hb_005333_130 0.0791230208 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007672_010 0.0827976093 - - PREDICTED: uncharacterized protein LOC105639669 isoform X1 [Jatropha curcas]
17 Hb_000009_160 0.0842158327 - - RUB1 conjugating enzyme 1 isoform 2 [Theobroma cacao]
18 Hb_008289_060 0.0844024449 - - PREDICTED: general transcription factor IIE subunit 1-like isoform X1 [Jatropha curcas]
19 Hb_002205_080 0.0849890502 - - 40S ribosomal protein S26, putative [Ricinus communis]
20 Hb_000015_080 0.087231182 - - PREDICTED: uncharacterized protein LOC105647918 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003018_200 Hb_003018_200 Hb_001863_390 Hb_001863_390 Hb_003018_200--Hb_001863_390 Hb_002603_100 Hb_002603_100 Hb_003018_200--Hb_002603_100 Hb_008453_090 Hb_008453_090 Hb_003018_200--Hb_008453_090 Hb_007101_150 Hb_007101_150 Hb_003018_200--Hb_007101_150 Hb_000056_340 Hb_000056_340 Hb_003018_200--Hb_000056_340 Hb_007101_130 Hb_007101_130 Hb_003018_200--Hb_007101_130 Hb_016065_010 Hb_016065_010 Hb_001863_390--Hb_016065_010 Hb_055062_030 Hb_055062_030 Hb_001863_390--Hb_055062_030 Hb_009486_130 Hb_009486_130 Hb_001863_390--Hb_009486_130 Hb_163145_020 Hb_163145_020 Hb_001863_390--Hb_163145_020 Hb_001863_390--Hb_008453_090 Hb_023386_080 Hb_023386_080 Hb_002603_100--Hb_023386_080 Hb_000376_050 Hb_000376_050 Hb_002603_100--Hb_000376_050 Hb_022250_040 Hb_022250_040 Hb_002603_100--Hb_022250_040 Hb_000956_010 Hb_000956_010 Hb_002603_100--Hb_000956_010 Hb_001243_050 Hb_001243_050 Hb_002603_100--Hb_001243_050 Hb_001671_020 Hb_001671_020 Hb_002603_100--Hb_001671_020 Hb_004951_040 Hb_004951_040 Hb_008453_090--Hb_004951_040 Hb_008453_090--Hb_016065_010 Hb_000193_290 Hb_000193_290 Hb_008453_090--Hb_000193_290 Hb_008453_090--Hb_055062_030 Hb_005333_130 Hb_005333_130 Hb_008453_090--Hb_005333_130 Hb_001828_090 Hb_001828_090 Hb_007101_150--Hb_001828_090 Hb_007101_150--Hb_000056_340 Hb_001512_070 Hb_001512_070 Hb_007101_150--Hb_001512_070 Hb_001257_080 Hb_001257_080 Hb_007101_150--Hb_001257_080 Hb_007741_050 Hb_007741_050 Hb_007101_150--Hb_007741_050 Hb_007672_010 Hb_007672_010 Hb_000056_340--Hb_007672_010 Hb_000056_340--Hb_001828_090 Hb_024835_030 Hb_024835_030 Hb_000056_340--Hb_024835_030 Hb_004012_010 Hb_004012_010 Hb_000056_340--Hb_004012_010 Hb_007101_130--Hb_007672_010 Hb_027472_180 Hb_027472_180 Hb_007101_130--Hb_027472_180 Hb_007101_130--Hb_008453_090 Hb_001184_110 Hb_001184_110 Hb_007101_130--Hb_001184_110 Hb_007101_130--Hb_000376_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.81873 0.410897 0.286941 0.221104 0.950814 0.75579
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.04246 1.49269 1.20566 0.411099 0.20023

CAGE analysis